Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SYNPOQ8N3V7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SYNPOQ8N3V7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SYNPOQ8N3V7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SYNPOQ8N3V7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SYNPOQ8N3V7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.37■■□□□ 1.81
SYNPOQ8N3V7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.37■■□□□ 1.81
SYNPOQ8N3V7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SYNPOQ8N3V7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SYNPOQ8N3V7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.35■■□□□ 1.81
SYNPOQ8N3V7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.34■■□□□ 1.81
SYNPOQ8N3V7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SYNPOQ8N3V7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SYNPOQ8N3V7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.34■■□□□ 1.81
SYNPOQ8N3V7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SYNPOQ8N3V7 NTF6A-201ENST00000591175 560 ntBASIC26.33■■□□□ 1.81
SYNPOQ8N3V7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SYNPOQ8N3V7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SYNPOQ8N3V7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SYNPOQ8N3V7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SYNPOQ8N3V7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SYNPOQ8N3V7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SYNPOQ8N3V7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SYNPOQ8N3V7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.29■■□□□ 1.8
SYNPOQ8N3V7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SYNPOQ8N3V7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SYNPOQ8N3V7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SYNPOQ8N3V7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
SYNPOQ8N3V7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.26■■□□□ 1.79
SYNPOQ8N3V7 AC012354.3-201ENST00000623734 483 ntBASIC26.26■■□□□ 1.79
SYNPOQ8N3V7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.25■■□□□ 1.79
SYNPOQ8N3V7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.24■■□□□ 1.79
SYNPOQ8N3V7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SYNPOQ8N3V7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.24■■□□□ 1.79
SYNPOQ8N3V7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SYNPOQ8N3V7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SYNPOQ8N3V7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.23■■□□□ 1.79
SYNPOQ8N3V7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SYNPOQ8N3V7 AC135983.2-203ENST00000454486 1613 ntBASIC26.23■■□□□ 1.79
SYNPOQ8N3V7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.23■■□□□ 1.79
SYNPOQ8N3V7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SYNPOQ8N3V7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SYNPOQ8N3V7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SYNPOQ8N3V7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SYNPOQ8N3V7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.22■■□□□ 1.79
SYNPOQ8N3V7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SYNPOQ8N3V7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SYNPOQ8N3V7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SYNPOQ8N3V7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SYNPOQ8N3V7 AC127502.1-201ENST00000399971 1502 ntBASIC26.2■■□□□ 1.79
SYNPOQ8N3V7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
SYNPOQ8N3V7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SYNPOQ8N3V7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SYNPOQ8N3V7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.2■■□□□ 1.78
SYNPOQ8N3V7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
SYNPOQ8N3V7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.19■■□□□ 1.78
SYNPOQ8N3V7 AC148477.6-201ENST00000623746 465 ntBASIC26.19■■□□□ 1.78
SYNPOQ8N3V7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SYNPOQ8N3V7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SYNPOQ8N3V7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SYNPOQ8N3V7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SYNPOQ8N3V7 WHAMMP2-203ENST00000563942 1603 ntBASIC26.17■■□□□ 1.78
SYNPOQ8N3V7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SYNPOQ8N3V7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SYNPOQ8N3V7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.16■■□□□ 1.78
SYNPOQ8N3V7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SYNPOQ8N3V7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SYNPOQ8N3V7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SYNPOQ8N3V7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
SYNPOQ8N3V7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SYNPOQ8N3V7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SYNPOQ8N3V7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.15■■□□□ 1.78
SYNPOQ8N3V7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SYNPOQ8N3V7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SYNPOQ8N3V7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SYNPOQ8N3V7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
SYNPOQ8N3V7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SYNPOQ8N3V7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SYNPOQ8N3V7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SYNPOQ8N3V7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SYNPOQ8N3V7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.12■■□□□ 1.77
SYNPOQ8N3V7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SYNPOQ8N3V7 AC110285.7-201ENST00000624417 1536 ntBASIC26.12■■□□□ 1.77
SYNPOQ8N3V7 AC060814.1-201ENST00000554326 538 ntBASIC26.11■■□□□ 1.77
SYNPOQ8N3V7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
SYNPOQ8N3V7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
SYNPOQ8N3V7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SYNPOQ8N3V7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SYNPOQ8N3V7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SYNPOQ8N3V7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SYNPOQ8N3V7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.09■■□□□ 1.77
SYNPOQ8N3V7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SYNPOQ8N3V7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SYNPOQ8N3V7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
SYNPOQ8N3V7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.08■■□□□ 1.77
SYNPOQ8N3V7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SYNPOQ8N3V7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
SYNPOQ8N3V7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.06■■□□□ 1.76
SYNPOQ8N3V7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SYNPOQ8N3V7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms