Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC144CPQ8IYA2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC144CPQ8IYA2 MIR639-201ENST00000384974 98 ntBASIC30.25■■■□□ 2.43
CCDC144CPQ8IYA2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC144CPQ8IYA2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC144CPQ8IYA2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC144CPQ8IYA2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC144CPQ8IYA2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
CCDC144CPQ8IYA2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC144CPQ8IYA2 MIR4449-201ENST00000578365 66 ntBASIC30.24■■■□□ 2.43
CCDC144CPQ8IYA2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC144CPQ8IYA2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.23■■■□□ 2.43
CCDC144CPQ8IYA2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.23■■■□□ 2.43
CCDC144CPQ8IYA2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.23■■■□□ 2.43
CCDC144CPQ8IYA2 MIR3648-2-201ENST00000581792 180 ntBASIC30.23■■■□□ 2.43
CCDC144CPQ8IYA2 MIR3648-1-201ENST00000615959 180 ntBASIC30.23■■■□□ 2.43
CCDC144CPQ8IYA2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
CCDC144CPQ8IYA2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC144CPQ8IYA2 LINC01971-201ENST00000617888 1048 ntBASIC30.21■■■□□ 2.43
CCDC144CPQ8IYA2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.21■■■□□ 2.43
CCDC144CPQ8IYA2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
CCDC144CPQ8IYA2 AC016575.1-201ENST00000607026 382 ntBASIC30.2■■■□□ 2.43
CCDC144CPQ8IYA2 DUX4L11-201ENST00000611504 1267 ntBASIC30.2■■■□□ 2.43
CCDC144CPQ8IYA2 DUX4L12-201ENST00000614593 1267 ntBASIC30.2■■■□□ 2.43
CCDC144CPQ8IYA2 DUX4L14-201ENST00000621227 1267 ntBASIC30.2■■■□□ 2.43
CCDC144CPQ8IYA2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CCDC144CPQ8IYA2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.19■■■□□ 2.42
CCDC144CPQ8IYA2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC144CPQ8IYA2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC144CPQ8IYA2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC144CPQ8IYA2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC144CPQ8IYA2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC144CPQ8IYA2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144CPQ8IYA2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144CPQ8IYA2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144CPQ8IYA2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC144CPQ8IYA2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC144CPQ8IYA2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC144CPQ8IYA2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC144CPQ8IYA2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CCDC144CPQ8IYA2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC144CPQ8IYA2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC144CPQ8IYA2 CR559946.2-201ENST00000623684 991 ntBASIC30.14■■■□□ 2.42
CCDC144CPQ8IYA2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.13■■■□□ 2.41
CCDC144CPQ8IYA2 LINC00273-201ENST00000539813 1452 ntBASIC30.12■■■□□ 2.41
CCDC144CPQ8IYA2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC144CPQ8IYA2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
CCDC144CPQ8IYA2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.11■■■□□ 2.41
CCDC144CPQ8IYA2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC144CPQ8IYA2 WHAMMP2-203ENST00000563942 1603 ntBASIC30.11■■■□□ 2.41
CCDC144CPQ8IYA2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
CCDC144CPQ8IYA2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144CPQ8IYA2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.1■■■□□ 2.41
CCDC144CPQ8IYA2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.1■■■□□ 2.41
CCDC144CPQ8IYA2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC144CPQ8IYA2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC144CPQ8IYA2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC144CPQ8IYA2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.09■■■□□ 2.41
CCDC144CPQ8IYA2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC144CPQ8IYA2 AC135983.2-203ENST00000454486 1613 ntBASIC30.09■■■□□ 2.41
CCDC144CPQ8IYA2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC144CPQ8IYA2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC144CPQ8IYA2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.08■■■□□ 2.41
CCDC144CPQ8IYA2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.07■■■□□ 2.4
CCDC144CPQ8IYA2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
CCDC144CPQ8IYA2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC144CPQ8IYA2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.05■■■□□ 2.4
CCDC144CPQ8IYA2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.04■■■□□ 2.4
CCDC144CPQ8IYA2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.04■■■□□ 2.4
CCDC144CPQ8IYA2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.04■■■□□ 2.4
CCDC144CPQ8IYA2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CCDC144CPQ8IYA2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
CCDC144CPQ8IYA2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.04■■■□□ 2.4
CCDC144CPQ8IYA2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
CCDC144CPQ8IYA2 AC100797.4-201ENST00000631653 1827 ntBASIC30.03■■■□□ 2.4
CCDC144CPQ8IYA2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC144CPQ8IYA2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.03■■■□□ 2.4
CCDC144CPQ8IYA2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC144CPQ8IYA2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.02■■■□□ 2.4
CCDC144CPQ8IYA2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC144CPQ8IYA2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
CCDC144CPQ8IYA2 AP004833.2-201ENST00000532228 1454 ntBASIC30.01■■■□□ 2.4
CCDC144CPQ8IYA2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
CCDC144CPQ8IYA2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30■■■□□ 2.39
CCDC144CPQ8IYA2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30■■■□□ 2.39
CCDC144CPQ8IYA2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCDC144CPQ8IYA2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30■■■□□ 2.39
CCDC144CPQ8IYA2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCDC144CPQ8IYA2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCDC144CPQ8IYA2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCDC144CPQ8IYA2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CCDC144CPQ8IYA2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CCDC144CPQ8IYA2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.99■■■□□ 2.39
CCDC144CPQ8IYA2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC144CPQ8IYA2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
CCDC144CPQ8IYA2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.98■■■□□ 2.39
CCDC144CPQ8IYA2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC144CPQ8IYA2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CCDC144CPQ8IYA2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CCDC144CPQ8IYA2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms