Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
C9orf40Q8IXQ3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.84■■□□□ 1.41
C9orf40Q8IXQ3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.84■■□□□ 1.41
C9orf40Q8IXQ3 AC139426.1-201ENST00000568218 2529 ntBASIC23.84■■□□□ 1.41
C9orf40Q8IXQ3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
C9orf40Q8IXQ3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.83■■□□□ 1.41
C9orf40Q8IXQ3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.83■■□□□ 1.41
C9orf40Q8IXQ3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
C9orf40Q8IXQ3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
C9orf40Q8IXQ3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
C9orf40Q8IXQ3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
C9orf40Q8IXQ3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
C9orf40Q8IXQ3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
C9orf40Q8IXQ3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
C9orf40Q8IXQ3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
C9orf40Q8IXQ3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.82■■□□□ 1.4
C9orf40Q8IXQ3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.82■■□□□ 1.4
C9orf40Q8IXQ3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
C9orf40Q8IXQ3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
C9orf40Q8IXQ3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
C9orf40Q8IXQ3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.81■■□□□ 1.4
C9orf40Q8IXQ3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.81■■□□□ 1.4
C9orf40Q8IXQ3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 DUX4L13-201ENST00000554103 1267 ntBASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 DUX4L15-201ENST00000611059 1267 ntBASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 DUX4L23-201ENST00000615195 1269 ntBASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 DUX4L24-201ENST00000617576 1269 ntBASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 DUX4L22-201ENST00000618238 1269 ntBASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 DUX4L20-201ENST00000619712 1269 ntBASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 DUX4L21-201ENST00000622058 1269 ntBASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 DUX4L10-201ENST00000622460 1267 ntBASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 DUX4L25-201ENST00000624915 1269 ntBASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.8■■□□□ 1.4
C9orf40Q8IXQ3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
C9orf40Q8IXQ3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.79■■□□□ 1.4
C9orf40Q8IXQ3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.79■■□□□ 1.4
C9orf40Q8IXQ3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.79■■□□□ 1.4
C9orf40Q8IXQ3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
C9orf40Q8IXQ3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
C9orf40Q8IXQ3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
C9orf40Q8IXQ3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.79■■□□□ 1.4
C9orf40Q8IXQ3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.78■■□□□ 1.4
C9orf40Q8IXQ3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.78■■□□□ 1.4
C9orf40Q8IXQ3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
C9orf40Q8IXQ3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.78■■□□□ 1.4
C9orf40Q8IXQ3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
C9orf40Q8IXQ3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
C9orf40Q8IXQ3 CR559946.2-201ENST00000623684 991 ntBASIC23.77■■□□□ 1.4
C9orf40Q8IXQ3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
C9orf40Q8IXQ3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
C9orf40Q8IXQ3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.76■■□□□ 1.39
C9orf40Q8IXQ3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.76■■□□□ 1.39
C9orf40Q8IXQ3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 AC100797.4-201ENST00000631653 1827 ntBASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.75■■□□□ 1.39
C9orf40Q8IXQ3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
C9orf40Q8IXQ3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
C9orf40Q8IXQ3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.74■■□□□ 1.39
C9orf40Q8IXQ3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.74■■□□□ 1.39
C9orf40Q8IXQ3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
C9orf40Q8IXQ3 MIR3648-2-201ENST00000581792 180 ntBASIC23.74■■□□□ 1.39
C9orf40Q8IXQ3 MIR3648-1-201ENST00000615959 180 ntBASIC23.74■■□□□ 1.39
C9orf40Q8IXQ3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.74■■□□□ 1.39
C9orf40Q8IXQ3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
C9orf40Q8IXQ3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.73■■□□□ 1.39
C9orf40Q8IXQ3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.73■■□□□ 1.39
C9orf40Q8IXQ3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
C9orf40Q8IXQ3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
C9orf40Q8IXQ3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
C9orf40Q8IXQ3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
C9orf40Q8IXQ3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.72■■□□□ 1.39
C9orf40Q8IXQ3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
C9orf40Q8IXQ3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.72■■□□□ 1.39
C9orf40Q8IXQ3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
C9orf40Q8IXQ3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.71■■□□□ 1.39
C9orf40Q8IXQ3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
C9orf40Q8IXQ3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.71■■□□□ 1.39
C9orf40Q8IXQ3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.39
C9orf40Q8IXQ3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.7■■□□□ 1.38
C9orf40Q8IXQ3 AC016575.1-201ENST00000607026 382 ntBASIC23.7■■□□□ 1.38
C9orf40Q8IXQ3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.69■■□□□ 1.38
C9orf40Q8IXQ3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
C9orf40Q8IXQ3 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.68■■□□□ 1.38
C9orf40Q8IXQ3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
C9orf40Q8IXQ3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
C9orf40Q8IXQ3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
C9orf40Q8IXQ3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
C9orf40Q8IXQ3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.67■■□□□ 1.38
C9orf40Q8IXQ3 AC110285.7-201ENST00000624417 1536 ntBASIC23.67■■□□□ 1.38
C9orf40Q8IXQ3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
C9orf40Q8IXQ3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
C9orf40Q8IXQ3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.66■■□□□ 1.38
C9orf40Q8IXQ3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms