Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
LRRC28Q86X40 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.6■■□□□ 1.21
LRRC28Q86X40 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LRRC28Q86X40 BX255925.1-201ENST00000566954 1854 ntBASIC22.6■■□□□ 1.21
LRRC28Q86X40 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.59■■□□□ 1.21
LRRC28Q86X40 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
LRRC28Q86X40 RPS2P35-201ENST00000443417 897 ntBASIC22.59■■□□□ 1.21
LRRC28Q86X40 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC28Q86X40 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.59■■□□□ 1.21
LRRC28Q86X40 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRC28Q86X40 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.58■■□□□ 1.21
LRRC28Q86X40 AL162393.1-201ENST00000437852 946 ntBASIC22.58■■□□□ 1.21
LRRC28Q86X40 MIR3665-201ENST00000578708 105 ntBASIC22.58■■□□□ 1.21
LRRC28Q86X40 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.58■■□□□ 1.21
LRRC28Q86X40 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LRRC28Q86X40 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
LRRC28Q86X40 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC28Q86X40 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRC28Q86X40 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LRRC28Q86X40 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC28Q86X40 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRC28Q86X40 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRC28Q86X40 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC28Q86X40 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC28Q86X40 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRC28Q86X40 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
LRRC28Q86X40 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC28Q86X40 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC28Q86X40 AC005559.1-201ENST00000589661 871 ntBASIC22.54■■□□□ 1.2
LRRC28Q86X40 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC28Q86X40 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
LRRC28Q86X40 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC28Q86X40 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC28Q86X40 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
LRRC28Q86X40 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.53■■□□□ 1.2
LRRC28Q86X40 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC28Q86X40 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC28Q86X40 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC28Q86X40 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC28Q86X40 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.51■■□□□ 1.19
LRRC28Q86X40 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC28Q86X40 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC28Q86X40 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.51■■□□□ 1.19
LRRC28Q86X40 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC28Q86X40 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC28Q86X40 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC28Q86X40 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC28Q86X40 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRC28Q86X40 DUX4L28-201ENST00000623687 678 ntBASIC22.5■■□□□ 1.19
LRRC28Q86X40 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
LRRC28Q86X40 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.49■■□□□ 1.19
LRRC28Q86X40 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRC28Q86X40 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRC28Q86X40 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRC28Q86X40 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LRRC28Q86X40 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LRRC28Q86X40 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRC28Q86X40 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
LRRC28Q86X40 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRC28Q86X40 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRC28Q86X40 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRC28Q86X40 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRC28Q86X40 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRC28Q86X40 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRC28Q86X40 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRC28Q86X40 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRC28Q86X40 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.46■■□□□ 1.19
LRRC28Q86X40 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRC28Q86X40 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
LRRC28Q86X40 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.46■■□□□ 1.19
LRRC28Q86X40 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRC28Q86X40 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
LRRC28Q86X40 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC28Q86X40 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.45■■□□□ 1.18
LRRC28Q86X40 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC28Q86X40 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.45■■□□□ 1.18
LRRC28Q86X40 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.45■■□□□ 1.18
LRRC28Q86X40 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC28Q86X40 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC28Q86X40 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC28Q86X40 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC28Q86X40 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
LRRC28Q86X40 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC28Q86X40 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC28Q86X40 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.44■■□□□ 1.18
LRRC28Q86X40 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC28Q86X40 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC28Q86X40 AC087741.3-201ENST00000624270 1347 ntBASIC22.43■■□□□ 1.18
LRRC28Q86X40 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRC28Q86X40 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
LRRC28Q86X40 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
LRRC28Q86X40 AL449106.1-201ENST00000608517 1980 ntBASIC22.43■■□□□ 1.18
LRRC28Q86X40 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.43■■□□□ 1.18
LRRC28Q86X40 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC28Q86X40 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.42■■□□□ 1.18
LRRC28Q86X40 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC28Q86X40 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.42■■□□□ 1.18
LRRC28Q86X40 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC28Q86X40 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC28Q86X40 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms