Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.3■■□□□ 1.32
CHMP1BQ7LBR1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.3■■□□□ 1.32
CHMP1BQ7LBR1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.3■■□□□ 1.32
CHMP1BQ7LBR1 DUX4L11-201ENST00000611504 1267 ntBASIC23.3■■□□□ 1.32
CHMP1BQ7LBR1 DUX4L12-201ENST00000614593 1267 ntBASIC23.3■■□□□ 1.32
CHMP1BQ7LBR1 DUX4L14-201ENST00000621227 1267 ntBASIC23.3■■□□□ 1.32
CHMP1BQ7LBR1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP1BQ7LBR1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.3■■□□□ 1.32
CHMP1BQ7LBR1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.3■■□□□ 1.32
CHMP1BQ7LBR1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHMP1BQ7LBR1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.29■■□□□ 1.32
CHMP1BQ7LBR1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHMP1BQ7LBR1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHMP1BQ7LBR1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.28■■□□□ 1.32
CHMP1BQ7LBR1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHMP1BQ7LBR1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHMP1BQ7LBR1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP1BQ7LBR1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.27■■□□□ 1.32
CHMP1BQ7LBR1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP1BQ7LBR1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.27■■□□□ 1.32
CHMP1BQ7LBR1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP1BQ7LBR1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.27■■□□□ 1.32
CHMP1BQ7LBR1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.26■■□□□ 1.31
CHMP1BQ7LBR1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.26■■□□□ 1.31
CHMP1BQ7LBR1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.26■■□□□ 1.31
CHMP1BQ7LBR1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.26■■□□□ 1.31
CHMP1BQ7LBR1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.26■■□□□ 1.31
CHMP1BQ7LBR1 AC127502.1-201ENST00000399971 1502 ntBASIC23.26■■□□□ 1.31
CHMP1BQ7LBR1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHMP1BQ7LBR1 LINC00273-201ENST00000539813 1452 ntBASIC23.25■■□□□ 1.31
CHMP1BQ7LBR1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.25■■□□□ 1.31
CHMP1BQ7LBR1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.24■■□□□ 1.31
CHMP1BQ7LBR1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP1BQ7LBR1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP1BQ7LBR1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP1BQ7LBR1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP1BQ7LBR1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHMP1BQ7LBR1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHMP1BQ7LBR1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.21■■□□□ 1.31
CHMP1BQ7LBR1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHMP1BQ7LBR1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CHMP1BQ7LBR1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.2■■□□□ 1.3
CHMP1BQ7LBR1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.2■■□□□ 1.3
CHMP1BQ7LBR1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHMP1BQ7LBR1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHMP1BQ7LBR1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHMP1BQ7LBR1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHMP1BQ7LBR1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.19■■□□□ 1.3
CHMP1BQ7LBR1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHMP1BQ7LBR1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHMP1BQ7LBR1 MIR3648-2-201ENST00000581792 180 ntBASIC23.19■■□□□ 1.3
CHMP1BQ7LBR1 MIR3648-1-201ENST00000615959 180 ntBASIC23.19■■□□□ 1.3
CHMP1BQ7LBR1 ST7-AS1-201ENST00000456775 1889 ntBASIC23.19■■□□□ 1.3
CHMP1BQ7LBR1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHMP1BQ7LBR1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CHMP1BQ7LBR1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CHMP1BQ7LBR1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHMP1BQ7LBR1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.18■■□□□ 1.3
CHMP1BQ7LBR1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHMP1BQ7LBR1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHMP1BQ7LBR1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 DUX4L13-201ENST00000554103 1267 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 AC016575.1-201ENST00000607026 382 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 DUX4L15-201ENST00000611059 1267 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 DUX4L23-201ENST00000615195 1269 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 DUX4L24-201ENST00000617576 1269 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 DUX4L22-201ENST00000618238 1269 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 DUX4L20-201ENST00000619712 1269 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 DUX4L21-201ENST00000622058 1269 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 DUX4L10-201ENST00000622460 1267 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 DUX4L25-201ENST00000624915 1269 ntBASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CHMP1BQ7LBR1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHMP1BQ7LBR1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHMP1BQ7LBR1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CHMP1BQ7LBR1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHMP1BQ7LBR1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHMP1BQ7LBR1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CHMP1BQ7LBR1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHMP1BQ7LBR1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
CHMP1BQ7LBR1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CHMP1BQ7LBR1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHMP1BQ7LBR1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CHMP1BQ7LBR1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHMP1BQ7LBR1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.14■■□□□ 1.29
CHMP1BQ7LBR1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHMP1BQ7LBR1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CHMP1BQ7LBR1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHMP1BQ7LBR1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.12■■□□□ 1.29
CHMP1BQ7LBR1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHMP1BQ7LBR1 CR559946.2-201ENST00000623684 991 ntBASIC23.12■■□□□ 1.29
CHMP1BQ7LBR1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP1BQ7LBR1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHMP1BQ7LBR1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP1BQ7LBR1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP1BQ7LBR1 MIR639-201ENST00000384974 98 ntBASIC23.1■■□□□ 1.29
CHMP1BQ7LBR1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP1BQ7LBR1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms