Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
FAM78BQ5VT40 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM78BQ5VT40 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM78BQ5VT40 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FAM78BQ5VT40 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FAM78BQ5VT40 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
FAM78BQ5VT40 RARRES2P7-201ENST00000567349 469 ntBASIC20.09■□□□□ 0.81
FAM78BQ5VT40 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM78BQ5VT40 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FAM78BQ5VT40 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
FAM78BQ5VT40 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM78BQ5VT40 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.08■□□□□ 0.8
FAM78BQ5VT40 AL133380.1-201ENST00000506013 324 ntBASIC20.07■□□□□ 0.8
FAM78BQ5VT40 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM78BQ5VT40 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.07■□□□□ 0.8
FAM78BQ5VT40 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM78BQ5VT40 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM78BQ5VT40 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.06■□□□□ 0.8
FAM78BQ5VT40 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.06■□□□□ 0.8
FAM78BQ5VT40 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM78BQ5VT40 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FAM78BQ5VT40 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM78BQ5VT40 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.04■□□□□ 0.8
FAM78BQ5VT40 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM78BQ5VT40 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM78BQ5VT40 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.03■□□□□ 0.8
FAM78BQ5VT40 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM78BQ5VT40 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
FAM78BQ5VT40 AP004833.2-201ENST00000532228 1454 ntBASIC20.03■□□□□ 0.8
FAM78BQ5VT40 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM78BQ5VT40 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
FAM78BQ5VT40 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM78BQ5VT40 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM78BQ5VT40 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.01■□□□□ 0.79
FAM78BQ5VT40 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FAM78BQ5VT40 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20■□□□□ 0.79
FAM78BQ5VT40 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM78BQ5VT40 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM78BQ5VT40 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FAM78BQ5VT40 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM78BQ5VT40 SETD8P1-201ENST00000623146 1180 ntBASIC19.99■□□□□ 0.79
FAM78BQ5VT40 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM78BQ5VT40 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FAM78BQ5VT40 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FAM78BQ5VT40 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FAM78BQ5VT40 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.98■□□□□ 0.79
FAM78BQ5VT40 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.98■□□□□ 0.79
FAM78BQ5VT40 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 LINC01003-201ENST00000564834 1764 ntBASIC19.97■□□□□ 0.79
FAM78BQ5VT40 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
FAM78BQ5VT40 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
FAM78BQ5VT40 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FAM78BQ5VT40 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.96■□□□□ 0.79
FAM78BQ5VT40 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
FAM78BQ5VT40 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
FAM78BQ5VT40 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms