Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRTCAP3Q53RY4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KRTCAP3Q53RY4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.21■■□□□ 1.31
KRTCAP3Q53RY4 WHAMMP2-203ENST00000563942 1603 ntBASIC23.21■■□□□ 1.31
KRTCAP3Q53RY4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
KRTCAP3Q53RY4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.2■■□□□ 1.3
KRTCAP3Q53RY4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KRTCAP3Q53RY4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.2■■□□□ 1.3
KRTCAP3Q53RY4 AC022413.1-201ENST00000624602 984 ntBASIC23.2■■□□□ 1.3
KRTCAP3Q53RY4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KRTCAP3Q53RY4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KRTCAP3Q53RY4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
KRTCAP3Q53RY4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KRTCAP3Q53RY4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
KRTCAP3Q53RY4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
KRTCAP3Q53RY4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRTCAP3Q53RY4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRTCAP3Q53RY4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRTCAP3Q53RY4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRTCAP3Q53RY4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
KRTCAP3Q53RY4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRTCAP3Q53RY4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KRTCAP3Q53RY4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.15■■□□□ 1.3
KRTCAP3Q53RY4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KRTCAP3Q53RY4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KRTCAP3Q53RY4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KRTCAP3Q53RY4 AC110285.7-201ENST00000624417 1536 ntBASIC23.14■■□□□ 1.3
KRTCAP3Q53RY4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
KRTCAP3Q53RY4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
KRTCAP3Q53RY4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
KRTCAP3Q53RY4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
KRTCAP3Q53RY4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.14■■□□□ 1.29
KRTCAP3Q53RY4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
KRTCAP3Q53RY4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.14■■□□□ 1.29
KRTCAP3Q53RY4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.14■■□□□ 1.29
KRTCAP3Q53RY4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KRTCAP3Q53RY4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KRTCAP3Q53RY4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KRTCAP3Q53RY4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KRTCAP3Q53RY4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KRTCAP3Q53RY4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
KRTCAP3Q53RY4 AC148477.6-201ENST00000623746 465 ntBASIC23.11■■□□□ 1.29
KRTCAP3Q53RY4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
KRTCAP3Q53RY4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KRTCAP3Q53RY4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KRTCAP3Q53RY4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.08■■□□□ 1.29
KRTCAP3Q53RY4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.08■■□□□ 1.29
KRTCAP3Q53RY4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.08■■□□□ 1.29
KRTCAP3Q53RY4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KRTCAP3Q53RY4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
KRTCAP3Q53RY4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
KRTCAP3Q53RY4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KRTCAP3Q53RY4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KRTCAP3Q53RY4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
KRTCAP3Q53RY4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
KRTCAP3Q53RY4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.05■■□□□ 1.28
KRTCAP3Q53RY4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.05■■□□□ 1.28
KRTCAP3Q53RY4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
KRTCAP3Q53RY4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KRTCAP3Q53RY4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KRTCAP3Q53RY4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
KRTCAP3Q53RY4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.04■■□□□ 1.28
KRTCAP3Q53RY4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
KRTCAP3Q53RY4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KRTCAP3Q53RY4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
KRTCAP3Q53RY4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
KRTCAP3Q53RY4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
KRTCAP3Q53RY4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
KRTCAP3Q53RY4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.02■■□□□ 1.28
KRTCAP3Q53RY4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
KRTCAP3Q53RY4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
KRTCAP3Q53RY4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.01■■□□□ 1.27
KRTCAP3Q53RY4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KRTCAP3Q53RY4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.01■■□□□ 1.27
KRTCAP3Q53RY4 NTF6A-201ENST00000591175 560 ntBASIC23.01■■□□□ 1.27
KRTCAP3Q53RY4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23■■□□□ 1.27
KRTCAP3Q53RY4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23■■□□□ 1.27
KRTCAP3Q53RY4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23■■□□□ 1.27
KRTCAP3Q53RY4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KRTCAP3Q53RY4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
KRTCAP3Q53RY4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KRTCAP3Q53RY4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.99■■□□□ 1.27
KRTCAP3Q53RY4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.98■■□□□ 1.27
KRTCAP3Q53RY4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KRTCAP3Q53RY4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.98■■□□□ 1.27
KRTCAP3Q53RY4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
KRTCAP3Q53RY4 MIR219A2-201ENST00000608502 1504 ntBASIC22.98■■□□□ 1.27
KRTCAP3Q53RY4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 AC060814.1-201ENST00000554326 538 ntBASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KRTCAP3Q53RY4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRTCAP3Q53RY4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KRTCAP3Q53RY4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms