Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RNF144AP50876 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF144AP50876 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF144AP50876 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.73■■□□□ 1.39
RNF144AP50876 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RNF144AP50876 AC044849.2-201ENST00000606596 710 ntBASIC23.72■■□□□ 1.39
RNF144AP50876 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF144AP50876 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF144AP50876 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF144AP50876 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF144AP50876 AC100797.4-201ENST00000631653 1827 ntBASIC23.69■■□□□ 1.38
RNF144AP50876 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF144AP50876 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF144AP50876 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF144AP50876 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF144AP50876 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF144AP50876 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF144AP50876 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF144AP50876 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF144AP50876 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF144AP50876 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF144AP50876 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF144AP50876 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
RNF144AP50876 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF144AP50876 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF144AP50876 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF144AP50876 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF144AP50876 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF144AP50876 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF144AP50876 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF144AP50876 WHAMMP2-203ENST00000563942 1603 ntBASIC23.64■■□□□ 1.38
RNF144AP50876 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF144AP50876 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF144AP50876 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF144AP50876 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
RNF144AP50876 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF144AP50876 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF144AP50876 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF144AP50876 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RNF144AP50876 AC142086.6-201ENST00000621154 1765 ntBASIC23.61■■□□□ 1.37
RNF144AP50876 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF144AP50876 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.61■■□□□ 1.37
RNF144AP50876 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF144AP50876 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF144AP50876 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF144AP50876 AC021231.2-201ENST00000594613 730 ntBASIC23.6■■□□□ 1.37
RNF144AP50876 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
RNF144AP50876 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF144AP50876 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF144AP50876 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF144AP50876 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF144AP50876 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF144AP50876 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
RNF144AP50876 AP004833.2-201ENST00000532228 1454 ntBASIC23.59■■□□□ 1.37
RNF144AP50876 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF144AP50876 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
RNF144AP50876 AC135983.2-203ENST00000454486 1613 ntBASIC23.59■■□□□ 1.37
RNF144AP50876 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF144AP50876 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF144AP50876 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF144AP50876 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF144AP50876 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF144AP50876 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.58■■□□□ 1.37
RNF144AP50876 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF144AP50876 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RNF144AP50876 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF144AP50876 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF144AP50876 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
RNF144AP50876 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF144AP50876 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF144AP50876 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF144AP50876 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF144AP50876 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF144AP50876 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
RNF144AP50876 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF144AP50876 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF144AP50876 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF144AP50876 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF144AP50876 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF144AP50876 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF144AP50876 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF144AP50876 LINC00273-201ENST00000539813 1452 ntBASIC23.55■■□□□ 1.36
RNF144AP50876 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF144AP50876 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF144AP50876 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF144AP50876 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF144AP50876 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF144AP50876 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF144AP50876 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF144AP50876 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF144AP50876 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
RNF144AP50876 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF144AP50876 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF144AP50876 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF144AP50876 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF144AP50876 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.52■■□□□ 1.36
RNF144AP50876 DUX4L29-201ENST00000425409 679 ntBASIC23.52■■□□□ 1.36
RNF144AP50876 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF144AP50876 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
RNF144AP50876 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms