Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL135925.1-201ENST00000605920 1701 ntBASIC28.91■■■□□ 2.22
CPT1AP50416 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CPT1AP50416 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
CPT1AP50416 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
CPT1AP50416 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.9■■■□□ 2.22
CPT1AP50416 AC022413.1-201ENST00000624602 984 ntBASIC28.9■■■□□ 2.22
CPT1AP50416 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
CPT1AP50416 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CPT1AP50416 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
CPT1AP50416 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
CPT1AP50416 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CPT1AP50416 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
CPT1AP50416 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CPT1AP50416 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CPT1AP50416 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CPT1AP50416 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
CPT1AP50416 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CPT1AP50416 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CPT1AP50416 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
CPT1AP50416 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
CPT1AP50416 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CPT1AP50416 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CPT1AP50416 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CPT1AP50416 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CPT1AP50416 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.85■■■□□ 2.21
CPT1AP50416 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CPT1AP50416 AC110285.7-201ENST00000624417 1536 ntBASIC28.84■■■□□ 2.21
CPT1AP50416 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.83■■■□□ 2.21
CPT1AP50416 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.82■■■□□ 2.2
CPT1AP50416 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.82■■■□□ 2.2
CPT1AP50416 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CPT1AP50416 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CPT1AP50416 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
CPT1AP50416 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CPT1AP50416 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
CPT1AP50416 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CPT1AP50416 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CPT1AP50416 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CPT1AP50416 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.8■■■□□ 2.2
CPT1AP50416 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CPT1AP50416 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CPT1AP50416 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CPT1AP50416 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.77■■■□□ 2.2
CPT1AP50416 AC148477.6-201ENST00000623746 465 ntBASIC28.77■■■□□ 2.2
CPT1AP50416 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.75■■■□□ 2.19
CPT1AP50416 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CPT1AP50416 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.75■■■□□ 2.19
CPT1AP50416 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
CPT1AP50416 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
CPT1AP50416 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CPT1AP50416 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CPT1AP50416 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CPT1AP50416 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.73■■■□□ 2.19
CPT1AP50416 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CPT1AP50416 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
CPT1AP50416 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.72■■■□□ 2.19
CPT1AP50416 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
CPT1AP50416 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.72■■■□□ 2.19
CPT1AP50416 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.72■■■□□ 2.19
CPT1AP50416 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CPT1AP50416 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.71■■■□□ 2.19
CPT1AP50416 NTF6A-201ENST00000591175 560 ntBASIC28.71■■■□□ 2.19
CPT1AP50416 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
CPT1AP50416 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CPT1AP50416 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.7■■■□□ 2.18
CPT1AP50416 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CPT1AP50416 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CPT1AP50416 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.69■■■□□ 2.18
CPT1AP50416 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
CPT1AP50416 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.66■■■□□ 2.18
CPT1AP50416 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.66■■■□□ 2.18
CPT1AP50416 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.66■■■□□ 2.18
CPT1AP50416 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CPT1AP50416 AC060814.1-201ENST00000554326 538 ntBASIC28.66■■■□□ 2.18
CPT1AP50416 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
CPT1AP50416 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CPT1AP50416 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CPT1AP50416 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.64■■■□□ 2.18
CPT1AP50416 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
CPT1AP50416 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
CPT1AP50416 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
CPT1AP50416 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CPT1AP50416 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
CPT1AP50416 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CPT1AP50416 MIR219A2-201ENST00000608502 1504 ntBASIC28.64■■■□□ 2.17
CPT1AP50416 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CPT1AP50416 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.63■■■□□ 2.17
CPT1AP50416 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
CPT1AP50416 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CPT1AP50416 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.63■■■□□ 2.17
CPT1AP50416 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
CPT1AP50416 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CPT1AP50416 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CPT1AP50416 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CPT1AP50416 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CPT1AP50416 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.61■■■□□ 2.17
CPT1AP50416 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CPT1AP50416 AC012354.3-201ENST00000623734 483 ntBASIC28.61■■■□□ 2.17
CPT1AP50416 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.61■■■□□ 2.17
CPT1AP50416 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms