Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SUPT3HO75486 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SUPT3HO75486 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SUPT3HO75486 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SUPT3HO75486 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SUPT3HO75486 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.21■■□□□ 1.63
SUPT3HO75486 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SUPT3HO75486 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SUPT3HO75486 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SUPT3HO75486 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
SUPT3HO75486 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SUPT3HO75486 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SUPT3HO75486 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.18■■□□□ 1.62
SUPT3HO75486 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SUPT3HO75486 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SUPT3HO75486 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
SUPT3HO75486 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SUPT3HO75486 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.17■■□□□ 1.62
SUPT3HO75486 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.17■■□□□ 1.62
SUPT3HO75486 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SUPT3HO75486 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
SUPT3HO75486 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SUPT3HO75486 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SUPT3HO75486 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
SUPT3HO75486 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SUPT3HO75486 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SUPT3HO75486 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SUPT3HO75486 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.15■■□□□ 1.62
SUPT3HO75486 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.15■■□□□ 1.62
SUPT3HO75486 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SUPT3HO75486 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SUPT3HO75486 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SUPT3HO75486 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SUPT3HO75486 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SUPT3HO75486 DUX4L28-201ENST00000623687 678 ntBASIC25.14■■□□□ 1.62
SUPT3HO75486 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.14■■□□□ 1.61
SUPT3HO75486 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SUPT3HO75486 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SUPT3HO75486 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.13■■□□□ 1.61
SUPT3HO75486 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SUPT3HO75486 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SUPT3HO75486 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SUPT3HO75486 AC100797.4-201ENST00000631653 1827 ntBASIC25.12■■□□□ 1.61
SUPT3HO75486 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SUPT3HO75486 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SUPT3HO75486 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.11■■□□□ 1.61
SUPT3HO75486 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.11■■□□□ 1.61
SUPT3HO75486 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SUPT3HO75486 AC108673.1-201ENST00000510422 1159 ntBASIC25.11■■□□□ 1.61
SUPT3HO75486 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SUPT3HO75486 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.1■■□□□ 1.61
SUPT3HO75486 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SUPT3HO75486 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SUPT3HO75486 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
SUPT3HO75486 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
SUPT3HO75486 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.09■■□□□ 1.61
SUPT3HO75486 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SUPT3HO75486 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SUPT3HO75486 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SUPT3HO75486 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SUPT3HO75486 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SUPT3HO75486 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SUPT3HO75486 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SUPT3HO75486 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.07■■□□□ 1.6
SUPT3HO75486 MIR6090-201ENST00000622481 60 ntBASIC25.07■■□□□ 1.6
SUPT3HO75486 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SUPT3HO75486 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SUPT3HO75486 MIR3665-201ENST00000578708 105 ntBASIC25.06■■□□□ 1.6
SUPT3HO75486 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
SUPT3HO75486 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.05■■□□□ 1.6
SUPT3HO75486 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SUPT3HO75486 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
SUPT3HO75486 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SUPT3HO75486 BX255925.1-201ENST00000566954 1854 ntBASIC25.04■■□□□ 1.6
SUPT3HO75486 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SUPT3HO75486 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
SUPT3HO75486 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.03■■□□□ 1.6
SUPT3HO75486 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SUPT3HO75486 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.02■■□□□ 1.6
SUPT3HO75486 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SUPT3HO75486 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SUPT3HO75486 AP006261.1-201ENST00000584783 668 ntBASIC25.01■■□□□ 1.59
SUPT3HO75486 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SUPT3HO75486 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25■■□□□ 1.59
SUPT3HO75486 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SUPT3HO75486 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25■■□□□ 1.59
SUPT3HO75486 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25■■□□□ 1.59
SUPT3HO75486 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25■■□□□ 1.59
SUPT3HO75486 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SUPT3HO75486 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25■■□□□ 1.59
SUPT3HO75486 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SUPT3HO75486 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.99■■□□□ 1.59
SUPT3HO75486 AC135983.2-203ENST00000454486 1613 ntBASIC24.99■■□□□ 1.59
SUPT3HO75486 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
SUPT3HO75486 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SUPT3HO75486 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SUPT3HO75486 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.98■■□□□ 1.59
SUPT3HO75486 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.98■■□□□ 1.59
SUPT3HO75486 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.98■■□□□ 1.59
SUPT3HO75486 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms