Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.27■■■□□ 2.28
CCNT1O60563 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.27■■■□□ 2.28
CCNT1O60563 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
CCNT1O60563 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.26■■■□□ 2.28
CCNT1O60563 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCNT1O60563 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCNT1O60563 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
CCNT1O60563 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
CCNT1O60563 ZNRF2P2-203ENST00000454624 420 ntBASIC29.24■■■□□ 2.27
CCNT1O60563 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCNT1O60563 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCNT1O60563 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.23■■■□□ 2.27
CCNT1O60563 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.22■■■□□ 2.27
CCNT1O60563 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CCNT1O60563 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.22■■■□□ 2.27
CCNT1O60563 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.22■■■□□ 2.27
CCNT1O60563 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.22■■■□□ 2.27
CCNT1O60563 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CCNT1O60563 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CCNT1O60563 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.21■■■□□ 2.27
CCNT1O60563 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.21■■■□□ 2.27
CCNT1O60563 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CCNT1O60563 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.21■■■□□ 2.27
CCNT1O60563 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CCNT1O60563 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.21■■■□□ 2.27
CCNT1O60563 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CCNT1O60563 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CCNT1O60563 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCNT1O60563 AC100797.4-201ENST00000631653 1827 ntBASIC29.19■■■□□ 2.26
CCNT1O60563 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.19■■■□□ 2.26
CCNT1O60563 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCNT1O60563 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.18■■■□□ 2.26
CCNT1O60563 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CCNT1O60563 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CCNT1O60563 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CCNT1O60563 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CCNT1O60563 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CCNT1O60563 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.16■■■□□ 2.26
CCNT1O60563 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.16■■■□□ 2.26
CCNT1O60563 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.15■■■□□ 2.26
CCNT1O60563 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CCNT1O60563 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
CCNT1O60563 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.15■■■□□ 2.26
CCNT1O60563 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CCNT1O60563 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CCNT1O60563 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CCNT1O60563 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.14■■■□□ 2.26
CCNT1O60563 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CCNT1O60563 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
CCNT1O60563 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.13■■■□□ 2.25
CCNT1O60563 LINC01971-201ENST00000617888 1048 ntBASIC29.13■■■□□ 2.25
CCNT1O60563 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CCNT1O60563 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.12■■■□□ 2.25
CCNT1O60563 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.11■■■□□ 2.25
CCNT1O60563 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CCNT1O60563 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.11■■■□□ 2.25
CCNT1O60563 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CCNT1O60563 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CCNT1O60563 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CCNT1O60563 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CCNT1O60563 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.09■■■□□ 2.25
CCNT1O60563 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
CCNT1O60563 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CCNT1O60563 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
CCNT1O60563 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CCNT1O60563 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.25
CCNT1O60563 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CCNT1O60563 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CCNT1O60563 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.06■■■□□ 2.24
CCNT1O60563 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.06■■■□□ 2.24
CCNT1O60563 DRD5P2-201ENST00000421395 2012 ntBASIC29.05■■■□□ 2.24
CCNT1O60563 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.05■■■□□ 2.24
CCNT1O60563 DUX4L11-201ENST00000611504 1267 ntBASIC29.05■■■□□ 2.24
CCNT1O60563 DUX4L12-201ENST00000614593 1267 ntBASIC29.05■■■□□ 2.24
CCNT1O60563 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.05■■■□□ 2.24
CCNT1O60563 DUX4L14-201ENST00000621227 1267 ntBASIC29.05■■■□□ 2.24
CCNT1O60563 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CCNT1O60563 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CCNT1O60563 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
CCNT1O60563 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
CCNT1O60563 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CCNT1O60563 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CCNT1O60563 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.03■■■□□ 2.24
CCNT1O60563 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.03■■■□□ 2.24
CCNT1O60563 MIR7108-201ENST00000614319 87 ntBASIC29.03■■■□□ 2.24
CCNT1O60563 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CCNT1O60563 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CCNT1O60563 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CCNT1O60563 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.01■■■□□ 2.23
CCNT1O60563 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.01■■■□□ 2.23
CCNT1O60563 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CCNT1O60563 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29■■■□□ 2.23
CCNT1O60563 CHML-204ENST00000638121 920 ntTSL 2 BASIC29■■■□□ 2.23
CCNT1O60563 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
CCNT1O60563 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CCNT1O60563 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CCNT1O60563 DUX4L13-201ENST00000554103 1267 ntBASIC28.98■■■□□ 2.23
CCNT1O60563 DUX4L15-201ENST00000611059 1267 ntBASIC28.98■■■□□ 2.23
CCNT1O60563 DUX4L23-201ENST00000615195 1269 ntBASIC28.98■■■□□ 2.23
CCNT1O60563 DUX4L24-201ENST00000617576 1269 ntBASIC28.98■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms