Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA1O15239 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFA1O15239 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFA1O15239 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.4■□□□□ 0.38
NDUFA1O15239 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFA1O15239 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFA1O15239 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.4■□□□□ 0.38
NDUFA1O15239 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFA1O15239 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
NDUFA1O15239 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.39■□□□□ 0.37
NDUFA1O15239 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.39■□□□□ 0.37
NDUFA1O15239 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NDUFA1O15239 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.38■□□□□ 0.37
NDUFA1O15239 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFA1O15239 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.37■□□□□ 0.37
NDUFA1O15239 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NDUFA1O15239 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NDUFA1O15239 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.37■□□□□ 0.37
NDUFA1O15239 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFA1O15239 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFA1O15239 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFA1O15239 AL449106.1-201ENST00000608517 1980 ntBASIC17.37■□□□□ 0.37
NDUFA1O15239 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFA1O15239 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFA1O15239 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.36■□□□□ 0.37
NDUFA1O15239 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.36■□□□□ 0.37
NDUFA1O15239 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.36■□□□□ 0.37
NDUFA1O15239 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NDUFA1O15239 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFA1O15239 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NDUFA1O15239 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.35■□□□□ 0.37
NDUFA1O15239 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NDUFA1O15239 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NDUFA1O15239 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.35■□□□□ 0.37
NDUFA1O15239 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFA1O15239 RARRES2P7-201ENST00000567349 469 ntBASIC17.34■□□□□ 0.37
NDUFA1O15239 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFA1O15239 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFA1O15239 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
NDUFA1O15239 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.33■□□□□ 0.37
NDUFA1O15239 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFA1O15239 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA1O15239 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA1O15239 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA1O15239 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NDUFA1O15239 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NDUFA1O15239 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.32■□□□□ 0.36
NDUFA1O15239 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA1O15239 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFA1O15239 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA1O15239 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFA1O15239 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA1O15239 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA1O15239 AC010864.1-201ENST00000609407 1511 ntBASIC17.31■□□□□ 0.36
NDUFA1O15239 LINC01003-201ENST00000564834 1764 ntBASIC17.3■□□□□ 0.36
NDUFA1O15239 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.3■□□□□ 0.36
NDUFA1O15239 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFA1O15239 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.3■□□□□ 0.36
NDUFA1O15239 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.3■□□□□ 0.36
NDUFA1O15239 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA1O15239 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA1O15239 AP004833.2-201ENST00000532228 1454 ntBASIC17.29■□□□□ 0.36
NDUFA1O15239 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFA1O15239 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
NDUFA1O15239 SETD8P1-201ENST00000623146 1180 ntBASIC17.28■□□□□ 0.36
NDUFA1O15239 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA1O15239 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFA1O15239 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.27■□□□□ 0.35
NDUFA1O15239 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFA1O15239 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NDUFA1O15239 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA1O15239 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA1O15239 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA1O15239 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA1O15239 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA1O15239 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms