Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDLIM1O00151 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.21■■□□□ 1.47
PDLIM1O00151 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDLIM1O00151 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.21■■□□□ 1.47
PDLIM1O00151 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
PDLIM1O00151 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PDLIM1O00151 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.2■■□□□ 1.46
PDLIM1O00151 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PDLIM1O00151 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.2■■□□□ 1.46
PDLIM1O00151 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDLIM1O00151 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.19■■□□□ 1.46
PDLIM1O00151 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.19■■□□□ 1.46
PDLIM1O00151 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDLIM1O00151 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PDLIM1O00151 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDLIM1O00151 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
PDLIM1O00151 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.18■■□□□ 1.46
PDLIM1O00151 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDLIM1O00151 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDLIM1O00151 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDLIM1O00151 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDLIM1O00151 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.16■■□□□ 1.46
PDLIM1O00151 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.16■■□□□ 1.46
PDLIM1O00151 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.16■■□□□ 1.46
PDLIM1O00151 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
PDLIM1O00151 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDLIM1O00151 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDLIM1O00151 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDLIM1O00151 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
PDLIM1O00151 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PDLIM1O00151 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDLIM1O00151 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.14■■□□□ 1.46
PDLIM1O00151 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDLIM1O00151 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDLIM1O00151 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDLIM1O00151 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.14■■□□□ 1.45
PDLIM1O00151 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDLIM1O00151 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDLIM1O00151 BX255925.1-201ENST00000566954 1854 ntBASIC24.13■■□□□ 1.45
PDLIM1O00151 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDLIM1O00151 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM1O00151 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM1O00151 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM1O00151 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.12■■□□□ 1.45
PDLIM1O00151 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM1O00151 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM1O00151 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
PDLIM1O00151 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM1O00151 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.11■■□□□ 1.45
PDLIM1O00151 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDLIM1O00151 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDLIM1O00151 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDLIM1O00151 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDLIM1O00151 CAHM-201ENST00000604200 896 ntBASIC24.1■■□□□ 1.45
PDLIM1O00151 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.1■■□□□ 1.45
PDLIM1O00151 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PDLIM1O00151 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDLIM1O00151 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDLIM1O00151 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PDLIM1O00151 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PDLIM1O00151 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PDLIM1O00151 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.07■■□□□ 1.44
PDLIM1O00151 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDLIM1O00151 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDLIM1O00151 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
PDLIM1O00151 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDLIM1O00151 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.07■■□□□ 1.44
PDLIM1O00151 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PDLIM1O00151 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDLIM1O00151 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDLIM1O00151 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
PDLIM1O00151 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.06■■□□□ 1.44
PDLIM1O00151 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDLIM1O00151 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PDLIM1O00151 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PDLIM1O00151 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDLIM1O00151 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.05■■□□□ 1.44
PDLIM1O00151 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.05■■□□□ 1.44
PDLIM1O00151 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PDLIM1O00151 SUZ12P1-203ENST00000578195 985 ntBASIC24.05■■□□□ 1.44
PDLIM1O00151 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
PDLIM1O00151 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.05■■□□□ 1.44
PDLIM1O00151 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.05■■□□□ 1.44
PDLIM1O00151 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
PDLIM1O00151 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.05■■□□□ 1.44
PDLIM1O00151 AL391121.1-201ENST00000607967 1349 ntBASIC24.05■■□□□ 1.44
PDLIM1O00151 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PDLIM1O00151 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDLIM1O00151 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.04■■□□□ 1.44
PDLIM1O00151 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDLIM1O00151 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PDLIM1O00151 AL449106.1-201ENST00000608517 1980 ntBASIC24.04■■□□□ 1.44
PDLIM1O00151 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDLIM1O00151 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PDLIM1O00151 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
PDLIM1O00151 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.03■■□□□ 1.44
PDLIM1O00151 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PDLIM1O00151 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PDLIM1O00151 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.02■■□□□ 1.44
PDLIM1O00151 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms