Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM90A16PA6NEW6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM90A16PA6NEW6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM90A16PA6NEW6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.63■■□□□ 1.05
FAM90A16PA6NEW6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
FAM90A16PA6NEW6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM90A16PA6NEW6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.62■■□□□ 1.05
FAM90A16PA6NEW6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
FAM90A16PA6NEW6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
FAM90A16PA6NEW6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FAM90A16PA6NEW6 AL121749.1-202ENST00000609313 2153 ntBASIC21.61■■□□□ 1.05
FAM90A16PA6NEW6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FAM90A16PA6NEW6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FAM90A16PA6NEW6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
FAM90A16PA6NEW6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
FAM90A16PA6NEW6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FAM90A16PA6NEW6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
FAM90A16PA6NEW6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FAM90A16PA6NEW6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
FAM90A16PA6NEW6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
FAM90A16PA6NEW6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FAM90A16PA6NEW6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.58■■□□□ 1.05
FAM90A16PA6NEW6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FAM90A16PA6NEW6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FAM90A16PA6NEW6 LINC01003-201ENST00000564834 1764 ntBASIC21.57■■□□□ 1.04
FAM90A16PA6NEW6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.57■■□□□ 1.04
FAM90A16PA6NEW6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FAM90A16PA6NEW6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.56■■□□□ 1.04
FAM90A16PA6NEW6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FAM90A16PA6NEW6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.56■■□□□ 1.04
FAM90A16PA6NEW6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FAM90A16PA6NEW6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FAM90A16PA6NEW6 AC100797.4-201ENST00000631653 1827 ntBASIC21.55■■□□□ 1.04
FAM90A16PA6NEW6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM90A16PA6NEW6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FAM90A16PA6NEW6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.55■■□□□ 1.04
FAM90A16PA6NEW6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FAM90A16PA6NEW6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.55■■□□□ 1.04
FAM90A16PA6NEW6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM90A16PA6NEW6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM90A16PA6NEW6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.54■■□□□ 1.04
FAM90A16PA6NEW6 AP002414.2-202ENST00000590929 1450 ntBASIC21.54■■□□□ 1.04
FAM90A16PA6NEW6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.54■■□□□ 1.04
FAM90A16PA6NEW6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FAM90A16PA6NEW6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
FAM90A16PA6NEW6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FAM90A16PA6NEW6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FAM90A16PA6NEW6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FAM90A16PA6NEW6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FAM90A16PA6NEW6 AC005559.1-201ENST00000589661 871 ntBASIC21.53■■□□□ 1.04
FAM90A16PA6NEW6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.52■■□□□ 1.04
FAM90A16PA6NEW6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
FAM90A16PA6NEW6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.52■■□□□ 1.04
FAM90A16PA6NEW6 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.52■■□□□ 1.04
FAM90A16PA6NEW6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.52■■□□□ 1.04
FAM90A16PA6NEW6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
FAM90A16PA6NEW6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FAM90A16PA6NEW6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.51■■□□□ 1.03
FAM90A16PA6NEW6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.51■■□□□ 1.03
FAM90A16PA6NEW6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
FAM90A16PA6NEW6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.5■■□□□ 1.03
FAM90A16PA6NEW6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FAM90A16PA6NEW6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
FAM90A16PA6NEW6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FAM90A16PA6NEW6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FAM90A16PA6NEW6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
FAM90A16PA6NEW6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
FAM90A16PA6NEW6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
FAM90A16PA6NEW6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FAM90A16PA6NEW6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FAM90A16PA6NEW6 AC108673.1-201ENST00000510422 1159 ntBASIC21.48■■□□□ 1.03
FAM90A16PA6NEW6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.48■■□□□ 1.03
FAM90A16PA6NEW6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.48■■□□□ 1.03
FAM90A16PA6NEW6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
FAM90A16PA6NEW6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FAM90A16PA6NEW6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FAM90A16PA6NEW6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FAM90A16PA6NEW6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.47■■□□□ 1.03
FAM90A16PA6NEW6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
FAM90A16PA6NEW6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FAM90A16PA6NEW6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FAM90A16PA6NEW6 AC135983.2-203ENST00000454486 1613 ntBASIC21.46■■□□□ 1.03
FAM90A16PA6NEW6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FAM90A16PA6NEW6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FAM90A16PA6NEW6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.45■■□□□ 1.02
FAM90A16PA6NEW6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FAM90A16PA6NEW6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.45■■□□□ 1.02
FAM90A16PA6NEW6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.44■■□□□ 1.02
FAM90A16PA6NEW6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.44■■□□□ 1.02
FAM90A16PA6NEW6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.44■■□□□ 1.02
FAM90A16PA6NEW6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
FAM90A16PA6NEW6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.43■■□□□ 1.02
FAM90A16PA6NEW6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM90A16PA6NEW6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FAM90A16PA6NEW6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
FAM90A16PA6NEW6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FAM90A16PA6NEW6 AP006261.1-201ENST00000584783 668 ntBASIC21.42■■□□□ 1.02
FAM90A16PA6NEW6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
FAM90A16PA6NEW6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FAM90A16PA6NEW6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms