Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRAV38-1A0A0B4J264 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRAV38-1A0A0B4J264 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.6■■□□□ 1.05
TRAV38-1A0A0B4J264 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
TRAV38-1A0A0B4J264 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV38-1A0A0B4J264 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
TRAV38-1A0A0B4J264 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.59■■□□□ 1.05
TRAV38-1A0A0B4J264 LINC01971-201ENST00000617888 1048 ntBASIC21.59■■□□□ 1.05
TRAV38-1A0A0B4J264 AL139393.2-201ENST00000608721 2025 ntBASIC21.58■■□□□ 1.05
TRAV38-1A0A0B4J264 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.58■■□□□ 1.05
TRAV38-1A0A0B4J264 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRAV38-1A0A0B4J264 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.58■■□□□ 1.04
TRAV38-1A0A0B4J264 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.57■■□□□ 1.04
TRAV38-1A0A0B4J264 AC135983.2-203ENST00000454486 1613 ntBASIC21.57■■□□□ 1.04
TRAV38-1A0A0B4J264 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV38-1A0A0B4J264 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV38-1A0A0B4J264 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.55■■□□□ 1.04
TRAV38-1A0A0B4J264 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TRAV38-1A0A0B4J264 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV38-1A0A0B4J264 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV38-1A0A0B4J264 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV38-1A0A0B4J264 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAV38-1A0A0B4J264 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV38-1A0A0B4J264 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV38-1A0A0B4J264 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.53■■□□□ 1.04
TRAV38-1A0A0B4J264 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV38-1A0A0B4J264 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV38-1A0A0B4J264 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV38-1A0A0B4J264 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV38-1A0A0B4J264 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAV38-1A0A0B4J264 MIR7108-201ENST00000614319 87 ntBASIC21.52■■□□□ 1.04
TRAV38-1A0A0B4J264 WHAMMP2-203ENST00000563942 1603 ntBASIC21.51■■□□□ 1.03
TRAV38-1A0A0B4J264 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV38-1A0A0B4J264 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV38-1A0A0B4J264 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV38-1A0A0B4J264 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRAV38-1A0A0B4J264 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAV38-1A0A0B4J264 AC139426.1-201ENST00000568218 2529 ntBASIC21.5■■□□□ 1.03
TRAV38-1A0A0B4J264 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.49■■□□□ 1.03
TRAV38-1A0A0B4J264 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.49■■□□□ 1.03
TRAV38-1A0A0B4J264 DUX4L11-201ENST00000611504 1267 ntBASIC21.49■■□□□ 1.03
TRAV38-1A0A0B4J264 DUX4L12-201ENST00000614593 1267 ntBASIC21.49■■□□□ 1.03
TRAV38-1A0A0B4J264 DUX4L14-201ENST00000621227 1267 ntBASIC21.49■■□□□ 1.03
TRAV38-1A0A0B4J264 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRAV38-1A0A0B4J264 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV38-1A0A0B4J264 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV38-1A0A0B4J264 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV38-1A0A0B4J264 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAV38-1A0A0B4J264 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV38-1A0A0B4J264 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.47■■□□□ 1.03
TRAV38-1A0A0B4J264 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRAV38-1A0A0B4J264 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRAV38-1A0A0B4J264 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAV38-1A0A0B4J264 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.46■■□□□ 1.03
TRAV38-1A0A0B4J264 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRAV38-1A0A0B4J264 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAV38-1A0A0B4J264 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAV38-1A0A0B4J264 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAV38-1A0A0B4J264 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.45■■□□□ 1.02
TRAV38-1A0A0B4J264 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TRAV38-1A0A0B4J264 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.45■■□□□ 1.02
TRAV38-1A0A0B4J264 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV38-1A0A0B4J264 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.44■■□□□ 1.02
TRAV38-1A0A0B4J264 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TRAV38-1A0A0B4J264 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 DUX4L13-201ENST00000554103 1267 ntBASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 DUX4L15-201ENST00000611059 1267 ntBASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 DUX4L23-201ENST00000615195 1269 ntBASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 DUX4L24-201ENST00000617576 1269 ntBASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 DUX4L22-201ENST00000618238 1269 ntBASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 DUX4L20-201ENST00000619712 1269 ntBASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 DUX4L21-201ENST00000622058 1269 ntBASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 DUX4L10-201ENST00000622460 1267 ntBASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 DUX4L25-201ENST00000624915 1269 ntBASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.43■■□□□ 1.02
TRAV38-1A0A0B4J264 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV38-1A0A0B4J264 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV38-1A0A0B4J264 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV38-1A0A0B4J264 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.42■■□□□ 1.02
TRAV38-1A0A0B4J264 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.42■■□□□ 1.02
TRAV38-1A0A0B4J264 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TRAV38-1A0A0B4J264 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV38-1A0A0B4J264 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.41■■□□□ 1.02
TRAV38-1A0A0B4J264 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TRAV38-1A0A0B4J264 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV38-1A0A0B4J264 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV38-1A0A0B4J264 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.41■■□□□ 1.02
TRAV38-1A0A0B4J264 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV38-1A0A0B4J264 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.4■■□□□ 1.02
TRAV38-1A0A0B4J264 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV38-1A0A0B4J264 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAV38-1A0A0B4J264 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAV38-1A0A0B4J264 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TRAV38-1A0A0B4J264 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV38-1A0A0B4J264 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
TRAV38-1A0A0B4J264 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV38-1A0A0B4J264 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV38-1A0A0B4J264 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms