Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV8-4A0A0B4J246 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV8-4A0A0B4J246 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV8-4A0A0B4J246 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-4A0A0B4J246 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-4A0A0B4J246 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRAV8-4A0A0B4J246 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV8-4A0A0B4J246 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-4A0A0B4J246 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV8-4A0A0B4J246 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-4A0A0B4J246 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-4A0A0B4J246 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-4A0A0B4J246 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-4A0A0B4J246 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-4A0A0B4J246 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-4A0A0B4J246 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV8-4A0A0B4J246 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-4A0A0B4J246 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-4A0A0B4J246 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-4A0A0B4J246 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRAV8-4A0A0B4J246 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-4A0A0B4J246 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-4A0A0B4J246 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV8-4A0A0B4J246 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-4A0A0B4J246 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-4A0A0B4J246 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-4A0A0B4J246 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.6■□□□□ 0.41
TRAV8-4A0A0B4J246 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV8-4A0A0B4J246 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAV8-4A0A0B4J246 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV8-4A0A0B4J246 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV8-4A0A0B4J246 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-4A0A0B4J246 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-4A0A0B4J246 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-4A0A0B4J246 MIR762-201ENST00000390236 83 ntBASIC17.59■□□□□ 0.41
TRAV8-4A0A0B4J246 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-4A0A0B4J246 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV8-4A0A0B4J246 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-4A0A0B4J246 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-4A0A0B4J246 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV8-4A0A0B4J246 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV8-4A0A0B4J246 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV8-4A0A0B4J246 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRAV8-4A0A0B4J246 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV8-4A0A0B4J246 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
TRAV8-4A0A0B4J246 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-4A0A0B4J246 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV8-4A0A0B4J246 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-4A0A0B4J246 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-4A0A0B4J246 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-4A0A0B4J246 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV8-4A0A0B4J246 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-4A0A0B4J246 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-4A0A0B4J246 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV8-4A0A0B4J246 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-4A0A0B4J246 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-4A0A0B4J246 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV8-4A0A0B4J246 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-4A0A0B4J246 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.55■□□□□ 0.4
TRAV8-4A0A0B4J246 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-4A0A0B4J246 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-4A0A0B4J246 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-4A0A0B4J246 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV8-4A0A0B4J246 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAV8-4A0A0B4J246 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV8-4A0A0B4J246 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV8-4A0A0B4J246 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-4A0A0B4J246 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-4A0A0B4J246 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-4A0A0B4J246 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-4A0A0B4J246 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-4A0A0B4J246 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV8-4A0A0B4J246 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-4A0A0B4J246 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV8-4A0A0B4J246 AC005559.1-201ENST00000589661 871 ntBASIC17.53■□□□□ 0.4
TRAV8-4A0A0B4J246 AL139393.2-201ENST00000608721 2025 ntBASIC17.53■□□□□ 0.4
TRAV8-4A0A0B4J246 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-4A0A0B4J246 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-4A0A0B4J246 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-4A0A0B4J246 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-4A0A0B4J246 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-4A0A0B4J246 SUZ12P1-203ENST00000578195 985 ntBASIC17.52■□□□□ 0.4
TRAV8-4A0A0B4J246 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-4A0A0B4J246 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV8-4A0A0B4J246 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.52■□□□□ 0.39
TRAV8-4A0A0B4J246 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-4A0A0B4J246 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-4A0A0B4J246 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV8-4A0A0B4J246 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-4A0A0B4J246 AP004833.2-201ENST00000532228 1454 ntBASIC17.5■□□□□ 0.39
TRAV8-4A0A0B4J246 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-4A0A0B4J246 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-4A0A0B4J246 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRAV8-4A0A0B4J246 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-4A0A0B4J246 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV8-4A0A0B4J246 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
TRAV8-4A0A0B4J246 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-4A0A0B4J246 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-4A0A0B4J246 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV8-4A0A0B4J246 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms