Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS25Q9BRG1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS25Q9BRG1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS25Q9BRG1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS25Q9BRG1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS25Q9BRG1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS25Q9BRG1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VPS25Q9BRG1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
VPS25Q9BRG1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS25Q9BRG1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VPS25Q9BRG1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
VPS25Q9BRG1 AC005332.7-201ENST00000614046 2005 ntBASIC13.83□□□□□ -0.2
VPS25Q9BRG1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS25Q9BRG1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.82□□□□□ -0.2
VPS25Q9BRG1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS25Q9BRG1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms