RNA–Protein interactions for RNA: ENST00000626810.1

GSEC-201, G-quadruplex forming sequence containing lncRNA, humanhuman

TSL 2 BASIC

Gene GSEC, Length 2,289 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSEC-201ENST00000626810 NISCHQ9Y2I1 1504 aa41.89■■■■■ 4.3
GSEC-201ENST00000626810 CCDC180Q9P1Z9 1646 aa36.51■■■■□ 3.44
GSEC-201ENST00000626810 ZCCHC6Q5VYS8 1495 aaKnown RBP35.18■■■■□ 3.22
GSEC-201ENST00000626810 ABCC9O60706 1549 aa34.66■■■■□ 3.14
GSEC-201ENST00000626810 DCAF8L2P0C7V8 631 aa34.62■■■■□ 3.13
GSEC-201ENST00000626810 DCAF1Q9Y4B6 1507 aa34.59■■■■□ 3.13
GSEC-201ENST00000626810 MYO15BQ96JP2 1530 aa34.19■■■■□ 3.06
GSEC-201ENST00000626810 SHROOM4Q9ULL8 1493 aa34.18■■■■□ 3.06
GSEC-201ENST00000626810 NACADO15069 1562 aa34.02■■■■□ 3.04
GSEC-201ENST00000626810 RB1CC1Q8TDY2 1594 aa33.75■■■□□ 2.99
GSEC-201ENST00000626810 SCRIBQ14160 1630 aa33.63■■■□□ 2.97
GSEC-201ENST00000626810 UNC13AQ9UPW8 1703 aa33.16■■■□□ 2.9
GSEC-201ENST00000626810 SUPT5HO00267 1087 aaKnown RBP32.82■■■□□ 2.85
GSEC-201ENST00000626810 BICRAQ9NZM4 1560 aa32.82■■■□□ 2.84
GSEC-201ENST00000626810 PABPN1Q86U42 306 aaKnown RBP eCLIP32.69■■■□□ 2.82
GSEC-201ENST00000626810 CECR2Q9BXF3 1484 aa32.61■■■□□ 2.81
GSEC-201ENST00000626810 RSF1Q96T23 1441 aaPredicted RBP32.49■■■□□ 2.79
GSEC-201ENST00000626810 MROH2BQ7Z745 1585 aa32.4■■■□□ 2.78
GSEC-201ENST00000626810 BAZ1AQ9NRL2 1556 aaPredicted RBP32.32■■■□□ 2.76
GSEC-201ENST00000626810 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
GSEC-201ENST00000626810 WIZO95785 1651 aa32.14■■■□□ 2.73
GSEC-201ENST00000626810 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
GSEC-201ENST00000626810 EIF4G1Q04637 1599 aaKnown RBP31.79■■■□□ 2.68
GSEC-201ENST00000626810 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
GSEC-201ENST00000626810 ATAD2BQ9ULI0 1458 aa31.71■■■□□ 2.67
GSEC-201ENST00000626810 SMARCA2P51531 1590 aa31.64■■■□□ 2.65
GSEC-201ENST00000626810 BAZ1BQ9UIG0 1483 aaKnown RBP31.5■■■□□ 2.63
GSEC-201ENST00000626810 CCDC88BA6NC98 1476 aa31.46■■■□□ 2.63
GSEC-201ENST00000626810 NCAPD3P42695 1498 aa31.42■■■□□ 2.62
GSEC-201ENST00000626810 CHIC1Q5VXU3 224 aa31.4■■■□□ 2.62
GSEC-201ENST00000626810 HMGXB3Q12766 1538 aa31.36■■■□□ 2.61
GSEC-201ENST00000626810 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
GSEC-201ENST00000626810 TRIM41Q8WV44 630 aa30.82■■■□□ 2.52
GSEC-201ENST00000626810 ABCC8Q09428 1581 aa30.8■■■□□ 2.52
GSEC-201ENST00000626810 CFTRP13569 1480 aa30.72■■■□□ 2.51
GSEC-201ENST00000626810 DNAJC5BQ9UF47 199 aa30.7■■■□□ 2.51
GSEC-201ENST00000626810 CADPSQ9ULU8 1353 aa30.61■■■□□ 2.49
GSEC-201ENST00000626810 WRNQ14191 1432 aaPredicted RBP eCLIP30.55■■■□□ 2.48
GSEC-201ENST00000626810 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
GSEC-201ENST00000626810 SYNJ1O43426 1573 aa30.48■■■□□ 2.47
GSEC-201ENST00000626810 NESP48681 1621 aa30.44■■■□□ 2.46
GSEC-201ENST00000626810 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
GSEC-201ENST00000626810 TOP2BQ02880 1626 aa30.32■■■□□ 2.44
GSEC-201ENST00000626810 FAM9AQ8IZU1 332 aaPredicted RBP30.31■■■□□ 2.44
GSEC-201ENST00000626810 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
GSEC-201ENST00000626810 CUX1P39880 1505 aa30.29■■■□□ 2.44
GSEC-201ENST00000626810 FANCD2Q9BXW9 1451 aa30.29■■■□□ 2.44
GSEC-201ENST00000626810 LOC105371045A0A1W2PR82 267 aa30.23■■■□□ 2.43
GSEC-201ENST00000626810 SOGA1O94964 1423 aa30.21■■■□□ 2.43
GSEC-201ENST00000626810 RUSC2Q8N2Y8 1516 aa30.13■■■□□ 2.41
GSEC-201ENST00000626810 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
GSEC-201ENST00000626810 CEP164Q9UPV0 1460 aa30.08■■■□□ 2.41
GSEC-201ENST00000626810 KIF21AQ7Z4S6 1674 aa30.05■■■□□ 2.4
GSEC-201ENST00000626810 EEA1Q15075 1411 aa30.02■■■□□ 2.4
GSEC-201ENST00000626810 DNMBPQ6XZF7 1577 aa29.99■■■□□ 2.39
GSEC-201ENST00000626810 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
GSEC-201ENST00000626810 URB2Q14146 1524 aaKnown RBP29.95■■■□□ 2.39
GSEC-201ENST00000626810 FGD5Q6ZNL6 1462 aa29.95■■■□□ 2.38
GSEC-201ENST00000626810 HRCP23327 699 aa29.92■■■□□ 2.38
GSEC-201ENST00000626810 EHMT2Q96KQ7 1210 aa29.92■■■□□ 2.38
GSEC-201ENST00000626810 CSRNP3Q8WYN3 585 aa29.92■■■□□ 2.38
GSEC-201ENST00000626810 POLA1P09884 1462 aaPredicted RBP29.82■■■□□ 2.36
GSEC-201ENST00000626810 PCGF6Q9BYE7 350 aa29.78■■■□□ 2.36
GSEC-201ENST00000626810 KIF27Q86VH2 1401 aa29.76■■■□□ 2.35
GSEC-201ENST00000626810 RAD54L2Q9Y4B4 1467 aa29.75■■■□□ 2.35
GSEC-201ENST00000626810 MRC2Q9UBG0 1479 aa29.75■■■□□ 2.35
GSEC-201ENST00000626810 CUX2O14529 1486 aa29.74■■■□□ 2.35
GSEC-201ENST00000626810 KIF21BO75037 1637 aa29.69■■■□□ 2.34
GSEC-201ENST00000626810 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
GSEC-201ENST00000626810 ERCC6Q03468 1493 aa29.66■■■□□ 2.34
GSEC-201ENST00000626810 GOLGA3Q08378 1498 aa29.64■■■□□ 2.34
GSEC-201ENST00000626810 WDR62O43379 1518 aa29.6■■■□□ 2.33
GSEC-201ENST00000626810 WDR97A6NE52 1622 aa29.6■■■□□ 2.33
GSEC-201ENST00000626810 PRXQ9BXM0 1461 aa29.59■■■□□ 2.33
GSEC-201ENST00000626810 RAPGEF2Q9Y4G8 1499 aa29.58■■■□□ 2.33
GSEC-201ENST00000626810 THOC2Q8NI27 1593 aaKnown RBP29.56■■■□□ 2.32
GSEC-201ENST00000626810 IGF1RP08069 1367 aa29.55■■■□□ 2.32
GSEC-201ENST00000626810 TNIKQ9UKE5 1360 aa29.54■■■□□ 2.32
GSEC-201ENST00000626810 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
GSEC-201ENST00000626810 UBTFP17480 764 aaKnown RBP29.52■■■□□ 2.32
GSEC-201ENST00000626810 ERICH3Q5RHP9 1530 aa29.49■■■□□ 2.31
GSEC-201ENST00000626810 TDRD9Q8NDG6 1382 aaKnown RBP29.46■■■□□ 2.31
GSEC-201ENST00000626810 ABCA5Q8WWZ7 1642 aa29.45■■■□□ 2.3
GSEC-201ENST00000626810 CEP162Q5TB80 1403 aa29.4■■■□□ 2.3
GSEC-201ENST00000626810 CARMIL1Q5VZK9 1371 aa29.38■■■□□ 2.29
GSEC-201ENST00000626810 GAPVD1Q14C86 1478 aa29.37■■■□□ 2.29
GSEC-201ENST00000626810 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
GSEC-201ENST00000626810 AQRO60306 1485 aaKnown RBP eCLIP29.28■■■□□ 2.28
GSEC-201ENST00000626810 CUL7Q14999 1698 aa29.28■■■□□ 2.28
GSEC-201ENST00000626810 ZNF608Q9ULD9 1512 aaPredicted RBP29.28■■■□□ 2.28
GSEC-201ENST00000626810 TRIM26Q12899 539 aaPredicted RBP29.26■■■□□ 2.27
GSEC-201ENST00000626810 PBRM1Q86U86 1689 aa29.23■■■□□ 2.27
GSEC-201ENST00000626810 PPARGC1BQ86YN6 1023 aaKnown RBP29.2■■■□□ 2.26
GSEC-201ENST00000626810 CLIP1P30622 1438 aa29.18■■■□□ 2.26
GSEC-201ENST00000626810 EIF4G3O43432 1585 aaKnown RBP29.15■■■□□ 2.26
GSEC-201ENST00000626810 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
GSEC-201ENST00000626810 RANGAP1P46060 587 aaPredicted RBP29.12■■■□□ 2.25
GSEC-201ENST00000626810 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
GSEC-201ENST00000626810 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
GSEC-201ENST00000626810 SNAPC4Q5SXM2 1469 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms