RNA–Protein interactions for RNA: ENST00000534526.6

FGD4-212, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 5 BASIC

Gene FGD4, Length 2,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-212ENST00000534526 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.67
FGD4-212ENST00000534526 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.07
FGD4-212ENST00000534526 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
FGD4-212ENST00000534526 SUPT5HO00267 1087 aaKnown RBP27.73■■■□□ 2.03
FGD4-212ENST00000534526 HRCP23327 699 aa27.53■■■□□ 2
FGD4-212ENST00000534526 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
FGD4-212ENST00000534526 PPARGC1BQ86YN6 1023 aaKnown RBP27.22■■□□□ 1.95
FGD4-212ENST00000534526 CHIC1Q5VXU3 224 aa27.18■■□□□ 1.94
FGD4-212ENST00000534526 PCGF6Q9BYE7 350 aa27.16■■□□□ 1.94
FGD4-212ENST00000534526 ZCCHC6Q5VYS8 1495 aaKnown RBP26.98■■□□□ 1.91
FGD4-212ENST00000534526 CCDC180Q9P1Z9 1646 aa26.81■■□□□ 1.88
FGD4-212ENST00000534526 PELP1Q8IZL8 1130 aaKnown RBP26.58■■□□□ 1.84
FGD4-212ENST00000534526 DCAF1Q9Y4B6 1507 aa26.57■■□□□ 1.84
FGD4-212ENST00000534526 LOC105371045A0A1W2PR82 267 aa26.55■■□□□ 1.84
FGD4-212ENST00000534526 ABCC9O60706 1549 aa26.53■■□□□ 1.84
FGD4-212ENST00000534526 TRIM26Q12899 539 aaPredicted RBP26.33■■□□□ 1.81
FGD4-212ENST00000534526 SCAF1Q9H7N4 1312 aaKnown RBP26.29■■□□□ 1.8
FGD4-212ENST00000534526 ZEB1P37275 1124 aaPredicted RBP25.96■■□□□ 1.75
FGD4-212ENST00000534526 SCRIBQ14160 1630 aa25.78■■□□□ 1.72
FGD4-212ENST00000534526 FAM9AQ8IZU1 332 aaPredicted RBP25.65■■□□□ 1.7
FGD4-212ENST00000534526 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
FGD4-212ENST00000534526 EHMT2Q96KQ7 1210 aa25.56■■□□□ 1.68
FGD4-212ENST00000534526 PABPN1Q86U42 306 aaKnown RBP eCLIP25.55■■□□□ 1.68
FGD4-212ENST00000534526 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
FGD4-212ENST00000534526 MYT1Q01538 1121 aa25.47■■□□□ 1.67
FGD4-212ENST00000534526 NEUROD1Q13562 356 aa25.43■■□□□ 1.66
FGD4-212ENST00000534526 RB1CC1Q8TDY2 1594 aa25.35■■□□□ 1.65
FGD4-212ENST00000534526 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.65
FGD4-212ENST00000534526 GTF3C3Q9Y5Q9 886 aa25.33■■□□□ 1.65
FGD4-212ENST00000534526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.29■■□□□ 1.64
FGD4-212ENST00000534526 CCER1Q8TC90 406 aaPredicted RBP25.2■■□□□ 1.62
FGD4-212ENST00000534526 NACADO15069 1562 aa25.19■■□□□ 1.62
FGD4-212ENST00000534526 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
FGD4-212ENST00000534526 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.61
FGD4-212ENST00000534526 CENPBP07199 599 aaPredicted RBP25.02■■□□□ 1.6
FGD4-212ENST00000534526 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.57
FGD4-212ENST00000534526 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
FGD4-212ENST00000534526 YTHDC1Q96MU7 727 aaKnown RBP24.75■■□□□ 1.55
FGD4-212ENST00000534526 WIZO95785 1651 aa24.73■■□□□ 1.55
FGD4-212ENST00000534526 ZNF316A6NFI3 1004 aaPredicted RBP24.67■■□□□ 1.54
FGD4-212ENST00000534526 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.53
FGD4-212ENST00000534526 UNC13AQ9UPW8 1703 aa24.64■■□□□ 1.53
FGD4-212ENST00000534526 CEP162Q5TB80 1403 aa24.58■■□□□ 1.53
FGD4-212ENST00000534526 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
FGD4-212ENST00000534526 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
FGD4-212ENST00000534526 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
FGD4-212ENST00000534526 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
FGD4-212ENST00000534526 MIER1Q8N108 512 aa24.5■■□□□ 1.51
FGD4-212ENST00000534526 BICRAQ9NZM4 1560 aa24.49■■□□□ 1.51
FGD4-212ENST00000534526 BCL11AQ9H165 835 aa24.47■■□□□ 1.51
FGD4-212ENST00000534526 TNIKQ9UKE5 1360 aa24.43■■□□□ 1.5
FGD4-212ENST00000534526 SOGA1O94964 1423 aa24.43■■□□□ 1.5
FGD4-212ENST00000534526 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
FGD4-212ENST00000534526 HNRNPUL2Q1KMD3 747 aaKnown RBP24.32■■□□□ 1.48
FGD4-212ENST00000534526 CSRNP3Q8WYN3 585 aa24.32■■□□□ 1.48
FGD4-212ENST00000534526 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
FGD4-212ENST00000534526 SMARCA4P51532 1647 aa24.25■■□□□ 1.47
FGD4-212ENST00000534526 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
FGD4-212ENST00000534526 EEA1Q15075 1411 aa24.18■■□□□ 1.46
FGD4-212ENST00000534526 SMARCA2P51531 1590 aa24.17■■□□□ 1.46
FGD4-212ENST00000534526 GOLGA3Q08378 1498 aa24.15■■□□□ 1.46
FGD4-212ENST00000534526 ANP32EQ9BTT0 268 aa24.06■■□□□ 1.44
FGD4-212ENST00000534526 SUPT16HQ9Y5B9 1047 aaKnown RBP23.99■■□□□ 1.43
FGD4-212ENST00000534526 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
FGD4-212ENST00000534526 CLIP1P30622 1438 aa23.97■■□□□ 1.43
FGD4-212ENST00000534526 DNAJC5BQ9UF47 199 aa23.94■■□□□ 1.42
FGD4-212ENST00000534526 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
FGD4-212ENST00000534526 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
FGD4-212ENST00000534526 APLP2Q06481 763 aa23.93■■□□□ 1.42
FGD4-212ENST00000534526 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
FGD4-212ENST00000534526 VPS8Q8N3P4 1428 aa23.92■■□□□ 1.42
FGD4-212ENST00000534526 TSHZ2Q9NRE2 1034 aa23.91■■□□□ 1.42
FGD4-212ENST00000534526 CLSPNQ9HAW4 1339 aa23.86■■□□□ 1.41
FGD4-212ENST00000534526 KIF21BO75037 1637 aa23.84■■□□□ 1.41
FGD4-212ENST00000534526 DHX57Q6P158 1386 aaKnown RBP23.8■■□□□ 1.4
FGD4-212ENST00000534526 PRKCSHP14314 528 aaPredicted RBP23.77■■□□□ 1.4
FGD4-212ENST00000534526 SYNJ1O43426 1573 aa23.77■■□□□ 1.4
FGD4-212ENST00000534526 RAPGEF2Q9Y4G8 1499 aa23.76■■□□□ 1.39
FGD4-212ENST00000534526 BCANQ96GW7 911 aa23.68■■□□□ 1.38
FGD4-212ENST00000534526 KCNH8Q96L42 1107 aa23.63■■□□□ 1.37
FGD4-212ENST00000534526 KANK4Q5T7N3 995 aaPredicted RBP23.6■■□□□ 1.37
FGD4-212ENST00000534526 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
FGD4-212ENST00000534526 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
FGD4-212ENST00000534526 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
FGD4-212ENST00000534526 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
FGD4-212ENST00000534526 ITGAEP38570 1179 aa23.45■■□□□ 1.34
FGD4-212ENST00000534526 RRBP1Q9P2E9 1410 aaKnown RBP23.44■■□□□ 1.34
FGD4-212ENST00000534526 FKBP8Q14318 412 aa23.43■■□□□ 1.34
FGD4-212ENST00000534526 CUX2O14529 1486 aa23.38■■□□□ 1.33
FGD4-212ENST00000534526 CCNB3Q8WWL7 1395 aa23.36■■□□□ 1.33
FGD4-212ENST00000534526 NESP48681 1621 aa23.36■■□□□ 1.33
FGD4-212ENST00000534526 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
FGD4-212ENST00000534526 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
FGD4-212ENST00000534526 TOP2BQ02880 1626 aa23.33■■□□□ 1.33
FGD4-212ENST00000534526 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
FGD4-212ENST00000534526 RBM19Q9Y4C8 960 aaKnown RBP23.31■■□□□ 1.32
FGD4-212ENST00000534526 RAB3GAP2Q9H2M9 1393 aa23.3■■□□□ 1.32
FGD4-212ENST00000534526 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
FGD4-212ENST00000534526 MSH5O43196 834 aa23.24■■□□□ 1.31
FGD4-212ENST00000534526 NEFLP07196 543 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms