RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
PTPN21-201ENST00000328736 SUPT5HO00267 1087 aaKnown RBP25.2■■□□□ 1.62
PTPN21-201ENST00000328736 SHROOM4Q9ULL8 1493 aa24.91■■□□□ 1.58
PTPN21-201ENST00000328736 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.57
PTPN21-201ENST00000328736 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
PTPN21-201ENST00000328736 PELP1Q8IZL8 1130 aaKnown RBP24.72■■□□□ 1.55
PTPN21-201ENST00000328736 APLP2Q06481 763 aa24.29■■□□□ 1.48
PTPN21-201ENST00000328736 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
PTPN21-201ENST00000328736 TTBK1Q5TCY1 1321 aaPredicted RBP23.92■■□□□ 1.42
PTPN21-201ENST00000328736 ERICH6Q7L0X2 663 aa23.65■■□□□ 1.38
PTPN21-201ENST00000328736 CCER1Q8TC90 406 aaPredicted RBP23.63■■□□□ 1.37
PTPN21-201ENST00000328736 PCGF6Q9BYE7 350 aa23.6■■□□□ 1.37
PTPN21-201ENST00000328736 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
PTPN21-201ENST00000328736 CENPBP07199 599 aaPredicted RBP23.39■■□□□ 1.34
PTPN21-201ENST00000328736 ATP1B4Q9UN42 357 aaPredicted RBP23.31■■□□□ 1.32
PTPN21-201ENST00000328736 ZEB1P37275 1124 aaPredicted RBP23.26■■□□□ 1.31
PTPN21-201ENST00000328736 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
PTPN21-201ENST00000328736 NEFLP07196 543 aa23.11■■□□□ 1.29
PTPN21-201ENST00000328736 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
PTPN21-201ENST00000328736 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
PTPN21-201ENST00000328736 YTHDC1Q96MU7 727 aaKnown RBP22.86■■□□□ 1.25
PTPN21-201ENST00000328736 MYT1Q01538 1121 aa22.69■■□□□ 1.22
PTPN21-201ENST00000328736 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
PTPN21-201ENST00000328736 DAXXQ9UER7 740 aaPredicted RBP22.67■■□□□ 1.22
PTPN21-201ENST00000328736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
PTPN21-201ENST00000328736 HNRNPUL2Q1KMD3 747 aaKnown RBP22.49■■□□□ 1.19
PTPN21-201ENST00000328736 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
PTPN21-201ENST00000328736 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
PTPN21-201ENST00000328736 ITGAEP38570 1179 aa22.44■■□□□ 1.18
PTPN21-201ENST00000328736 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
PTPN21-201ENST00000328736 CNGB1Q14028 1251 aaPredicted RBP22.24■■□□□ 1.15
PTPN21-201ENST00000328736 SLC4A1APQ9BWU0 796 aaKnown RBP22.21■■□□□ 1.15
PTPN21-201ENST00000328736 HRCP23327 699 aa22.17■■□□□ 1.14
PTPN21-201ENST00000328736 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.13
PTPN21-201ENST00000328736 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.12
PTPN21-201ENST00000328736 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
PTPN21-201ENST00000328736 RTL5Q5HYW3 569 aaPredicted RBP21.96■■□□□ 1.11
PTPN21-201ENST00000328736 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
PTPN21-201ENST00000328736 ZBTB47Q9UFB7 747 aaPredicted RBP21.78■■□□□ 1.08
PTPN21-201ENST00000328736 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
PTPN21-201ENST00000328736 FAM50AQ14320 339 aaKnown RBP21.75■■□□□ 1.07
PTPN21-201ENST00000328736 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
PTPN21-201ENST00000328736 ABCC9O60706 1549 aa21.65■■□□□ 1.06
PTPN21-201ENST00000328736 NEUROD1Q13562 356 aa21.64■■□□□ 1.06
PTPN21-201ENST00000328736 BCANQ96GW7 911 aa21.53■■□□□ 1.04
PTPN21-201ENST00000328736 NEFMP07197 916 aa21.52■■□□□ 1.04
PTPN21-201ENST00000328736 SLC24A1O60721 1099 aa21.51■■□□□ 1.03
PTPN21-201ENST00000328736 ANP32CO43423 234 aa21.49■■□□□ 1.03
PTPN21-201ENST00000328736 CANXP27824 592 aaKnown RBP21.49■■□□□ 1.03
PTPN21-201ENST00000328736 ZNF326Q5BKZ1 582 aaKnown RBP21.48■■□□□ 1.03
PTPN21-201ENST00000328736 CDK11AQ9UQ88 783 aaPredicted RBP21.42■■□□□ 1.02
PTPN21-201ENST00000328736 ARID3CA6NKF2 412 aa21.37■■□□□ 1.01
PTPN21-201ENST00000328736 FBLN2P98095 1184 aa21.35■■□□□ 1.01
PTPN21-201ENST00000328736 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1.01
PTPN21-201ENST00000328736 P3H3Q8IVL6 736 aa21.32■■□□□ 1
PTPN21-201ENST00000328736 BCL11AQ9H165 835 aa21.29■■□□□ 1
PTPN21-201ENST00000328736 ESF1Q9H501 851 aaKnown RBP21.18■□□□□ 0.98
PTPN21-201ENST00000328736 ANP32AP39687 249 aaKnown RBP21.13■□□□□ 0.97
PTPN21-201ENST00000328736 ANP32BQ92688 251 aaKnown RBP21.08■□□□□ 0.97
PTPN21-201ENST00000328736 ZNF777Q9ULD5 760 aaPredicted RBP21.04■□□□□ 0.96
PTPN21-201ENST00000328736 STAG3Q9UJ98 1225 aa21.03■□□□□ 0.96
PTPN21-201ENST00000328736 HSP90AA1P07900 732 aaKnown RBP20.98■□□□□ 0.95
PTPN21-201ENST00000328736 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
PTPN21-201ENST00000328736 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
PTPN21-201ENST00000328736 UPF2Q9HAU5 1272 aaKnown RBP20.94■□□□□ 0.94
PTPN21-201ENST00000328736 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
PTPN21-201ENST00000328736 CHGAP10645 457 aaKnown RBP20.91■□□□□ 0.94
PTPN21-201ENST00000328736 ACIN1Q9UKV3 1341 aaKnown RBP20.88■□□□□ 0.93
PTPN21-201ENST00000328736 NPM1P06748 294 aaKnown RBP eCLIP20.87■□□□□ 0.93
PTPN21-201ENST00000328736 TONSLQ96HA7 1378 aa20.81■□□□□ 0.92
PTPN21-201ENST00000328736 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
PTPN21-201ENST00000328736 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.75■□□□□ 0.91
PTPN21-201ENST00000328736 FKBP8Q14318 412 aa20.73■□□□□ 0.91
PTPN21-201ENST00000328736 SALL2Q9Y467 1007 aaPredicted RBP20.72■□□□□ 0.91
PTPN21-201ENST00000328736 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
PTPN21-201ENST00000328736 DDX10Q13206 875 aaKnown RBP20.7■□□□□ 0.9
PTPN21-201ENST00000328736 CDK11BP21127 795 aaKnown RBP20.69■□□□□ 0.9
PTPN21-201ENST00000328736 FAM9BQ8IZU0 186 aa20.68■□□□□ 0.9
PTPN21-201ENST00000328736 WDR43Q15061 677 aaKnown RBP eCLIP20.66■□□□□ 0.9
PTPN21-201ENST00000328736 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.89
PTPN21-201ENST00000328736 EIF5BO60841 1220 aaKnown RBP20.63■□□□□ 0.89
PTPN21-201ENST00000328736 SCAF1Q9H7N4 1312 aaKnown RBP20.62■□□□□ 0.89
PTPN21-201ENST00000328736 MYH16Q9H6N6 1097 aa20.61■□□□□ 0.89
PTPN21-201ENST00000328736 HIRIP3Q9BW71 556 aaPredicted RBP20.61■□□□□ 0.89
PTPN21-201ENST00000328736 GLIPR1L2Q4G1C9 344 aa20.6■□□□□ 0.89
PTPN21-201ENST00000328736 TMC1Q8TDI8 760 aa20.6■□□□□ 0.89
PTPN21-201ENST00000328736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.89
PTPN21-201ENST00000328736 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
PTPN21-201ENST00000328736 CCDC136Q96JN2 1154 aa20.54■□□□□ 0.88
PTPN21-201ENST00000328736 A0A0G2JS52 829 aa20.53■□□□□ 0.88
PTPN21-201ENST00000328736 ZCCHC6Q5VYS8 1495 aaKnown RBP20.52■□□□□ 0.88
PTPN21-201ENST00000328736 TSPY4P0CV99 314 aa20.51■□□□□ 0.87
PTPN21-201ENST00000328736 TSPY10P0CW01 314 aa20.51■□□□□ 0.87
PTPN21-201ENST00000328736 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
PTPN21-201ENST00000328736 IRX6P78412 446 aaPredicted RBP20.5■□□□□ 0.87
PTPN21-201ENST00000328736 KDM2AQ9Y2K7 1162 aa20.5■□□□□ 0.87
PTPN21-201ENST00000328736 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
PTPN21-201ENST00000328736 SENP3-EIF4A1A0A087X0R7 540 aa20.44■□□□□ 0.86
PTPN21-201ENST00000328736 ZBTB7CA1YPR0 619 aa20.43■□□□□ 0.86
PTPN21-201ENST00000328736 NCLP19338 710 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms