RNA–Protein interactions for RNA: ENST00000370606.3

ZIC3-202, Transcript of Zic family member 3, humanhuman

TSL 5 BASIC

Gene ZIC3, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-202ENST00000370606 NISCHQ9Y2I1 1504 aa41.69■■■■■ 4.26
ZIC3-202ENST00000370606 CCDC180Q9P1Z9 1646 aa36.54■■■■□ 3.44
ZIC3-202ENST00000370606 ABCC9O60706 1549 aa34.96■■■■□ 3.19
ZIC3-202ENST00000370606 ZCCHC6Q5VYS8 1495 aaKnown RBP34.93■■■■□ 3.18
ZIC3-202ENST00000370606 DCAF8L2P0C7V8 631 aa34.67■■■■□ 3.14
ZIC3-202ENST00000370606 DCAF1Q9Y4B6 1507 aa34.44■■■■□ 3.1
ZIC3-202ENST00000370606 MYO15BQ96JP2 1530 aa34.17■■■■□ 3.06
ZIC3-202ENST00000370606 NACADO15069 1562 aa34.13■■■■□ 3.05
ZIC3-202ENST00000370606 RB1CC1Q8TDY2 1594 aa33.95■■■■□ 3.03
ZIC3-202ENST00000370606 SHROOM4Q9ULL8 1493 aa33.8■■■■□ 3
ZIC3-202ENST00000370606 SCRIBQ14160 1630 aa33.59■■■□□ 2.97
ZIC3-202ENST00000370606 UNC13AQ9UPW8 1703 aa33.26■■■□□ 2.92
ZIC3-202ENST00000370606 PABPN1Q86U42 306 aaKnown RBP eCLIP32.91■■■□□ 2.86
ZIC3-202ENST00000370606 BICRAQ9NZM4 1560 aa32.91■■■□□ 2.86
ZIC3-202ENST00000370606 CECR2Q9BXF3 1484 aa32.44■■■□□ 2.78
ZIC3-202ENST00000370606 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
ZIC3-202ENST00000370606 BAZ1AQ9NRL2 1556 aaPredicted RBP32.23■■■□□ 2.75
ZIC3-202ENST00000370606 MROH2BQ7Z745 1585 aa32.2■■■□□ 2.75
ZIC3-202ENST00000370606 RSF1Q96T23 1441 aaPredicted RBP32.18■■■□□ 2.74
ZIC3-202ENST00000370606 SMARCA4P51532 1647 aa32.14■■■□□ 2.74
ZIC3-202ENST00000370606 EIF4G1Q04637 1599 aaKnown RBP31.97■■■□□ 2.71
ZIC3-202ENST00000370606 WIZO95785 1651 aa31.94■■■□□ 2.7
ZIC3-202ENST00000370606 PEG3Q9GZU2 1588 aa31.74■■■□□ 2.67
ZIC3-202ENST00000370606 ATAD2BQ9ULI0 1458 aa31.71■■■□□ 2.67
ZIC3-202ENST00000370606 SMARCA2P51531 1590 aa31.69■■■□□ 2.66
ZIC3-202ENST00000370606 CC2D2AQ9P2K1 1620 aa31.61■■■□□ 2.65
ZIC3-202ENST00000370606 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.65
ZIC3-202ENST00000370606 BAZ1BQ9UIG0 1483 aaKnown RBP31.53■■■□□ 2.64
ZIC3-202ENST00000370606 NCAPD3P42695 1498 aa31.49■■■□□ 2.63
ZIC3-202ENST00000370606 HMGXB3Q12766 1538 aa31.41■■■□□ 2.62
ZIC3-202ENST00000370606 CCDC88BA6NC98 1476 aa31.26■■■□□ 2.59
ZIC3-202ENST00000370606 DNAJC5BQ9UF47 199 aa31.19■■■□□ 2.58
ZIC3-202ENST00000370606 CFTRP13569 1480 aa30.69■■■□□ 2.5
ZIC3-202ENST00000370606 CHIC1Q5VXU3 224 aa30.68■■■□□ 2.5
ZIC3-202ENST00000370606 CADPSQ9ULU8 1353 aa30.67■■■□□ 2.5
ZIC3-202ENST00000370606 NESP48681 1621 aa30.56■■■□□ 2.48
ZIC3-202ENST00000370606 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
ZIC3-202ENST00000370606 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
ZIC3-202ENST00000370606 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
ZIC3-202ENST00000370606 TRIM41Q8WV44 630 aa30.41■■■□□ 2.46
ZIC3-202ENST00000370606 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
ZIC3-202ENST00000370606 WRNQ14191 1432 aaPredicted RBP eCLIP30.33■■■□□ 2.45
ZIC3-202ENST00000370606 PDS5BQ9NTI5 1447 aa30.3■■■□□ 2.44
ZIC3-202ENST00000370606 SYNJ1O43426 1573 aa30.22■■■□□ 2.43
ZIC3-202ENST00000370606 CEP164Q9UPV0 1460 aa30.2■■■□□ 2.43
ZIC3-202ENST00000370606 KIF21AQ7Z4S6 1674 aa30.19■■■□□ 2.42
ZIC3-202ENST00000370606 CUX1P39880 1505 aa30.13■■■□□ 2.41
ZIC3-202ENST00000370606 TOP2BQ02880 1626 aa30.12■■■□□ 2.41
ZIC3-202ENST00000370606 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
ZIC3-202ENST00000370606 ERCC6Q03468 1493 aa30.04■■■□□ 2.4
ZIC3-202ENST00000370606 DNMBPQ6XZF7 1577 aa29.99■■■□□ 2.39
ZIC3-202ENST00000370606 URB2Q14146 1524 aaKnown RBP29.98■■■□□ 2.39
ZIC3-202ENST00000370606 TOPBP1Q92547 1522 aa29.97■■■□□ 2.39
ZIC3-202ENST00000370606 MRC2Q9UBG0 1479 aa29.92■■■□□ 2.38
ZIC3-202ENST00000370606 FGD5Q6ZNL6 1462 aa29.88■■■□□ 2.37
ZIC3-202ENST00000370606 FAM9AQ8IZU1 332 aaPredicted RBP29.88■■■□□ 2.37
ZIC3-202ENST00000370606 SOGA1O94964 1423 aa29.82■■■□□ 2.36
ZIC3-202ENST00000370606 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
ZIC3-202ENST00000370606 THOC2Q8NI27 1593 aaKnown RBP29.77■■■□□ 2.36
ZIC3-202ENST00000370606 WDR62O43379 1518 aa29.77■■■□□ 2.36
ZIC3-202ENST00000370606 RUSC2Q8N2Y8 1516 aa29.73■■■□□ 2.35
ZIC3-202ENST00000370606 RAD54L2Q9Y4B4 1467 aa29.7■■■□□ 2.35
ZIC3-202ENST00000370606 EEA1Q15075 1411 aa29.65■■■□□ 2.34
ZIC3-202ENST00000370606 CUX2O14529 1486 aa29.63■■■□□ 2.33
ZIC3-202ENST00000370606 KIF27Q86VH2 1401 aa29.6■■■□□ 2.33
ZIC3-202ENST00000370606 ABCA10Q8WWZ4 1543 aa29.59■■■□□ 2.33
ZIC3-202ENST00000370606 CSRNP3Q8WYN3 585 aa29.57■■■□□ 2.32
ZIC3-202ENST00000370606 TARBP1Q13395 1621 aaKnown RBP29.55■■■□□ 2.32
ZIC3-202ENST00000370606 LOC105371045A0A1W2PR82 267 aa29.53■■■□□ 2.32
ZIC3-202ENST00000370606 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
ZIC3-202ENST00000370606 EHMT2Q96KQ7 1210 aa29.5■■■□□ 2.31
ZIC3-202ENST00000370606 IFT140Q96RY7 1462 aa29.49■■■□□ 2.31
ZIC3-202ENST00000370606 TDRD9Q8NDG6 1382 aaKnown RBP29.47■■■□□ 2.31
ZIC3-202ENST00000370606 ABCA5Q8WWZ7 1642 aa29.38■■■□□ 2.29
ZIC3-202ENST00000370606 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
ZIC3-202ENST00000370606 IGF1RP08069 1367 aa29.36■■■□□ 2.29
ZIC3-202ENST00000370606 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
ZIC3-202ENST00000370606 AQRO60306 1485 aaKnown RBP eCLIP29.34■■■□□ 2.29
ZIC3-202ENST00000370606 KIF21BO75037 1637 aa29.3■■■□□ 2.28
ZIC3-202ENST00000370606 PRXQ9BXM0 1461 aa29.27■■■□□ 2.28
ZIC3-202ENST00000370606 EIF4G3O43432 1585 aaKnown RBP29.25■■■□□ 2.27
ZIC3-202ENST00000370606 GOLGA3Q08378 1498 aa29.25■■■□□ 2.27
ZIC3-202ENST00000370606 ERICH3Q5RHP9 1530 aa29.24■■■□□ 2.27
ZIC3-202ENST00000370606 RAPGEF2Q9Y4G8 1499 aa29.24■■■□□ 2.27
ZIC3-202ENST00000370606 PBRM1Q86U86 1689 aa29.23■■■□□ 2.27
ZIC3-202ENST00000370606 CARMIL1Q5VZK9 1371 aa29.22■■■□□ 2.27
ZIC3-202ENST00000370606 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.26
ZIC3-202ENST00000370606 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
ZIC3-202ENST00000370606 CUL7Q14999 1698 aa29.18■■■□□ 2.26
ZIC3-202ENST00000370606 TNIKQ9UKE5 1360 aa29.06■■■□□ 2.24
ZIC3-202ENST00000370606 SNAPC4Q5SXM2 1469 aa29.06■■■□□ 2.24
ZIC3-202ENST00000370606 ADAMTS12P58397 1594 aa29.04■■■□□ 2.24
ZIC3-202ENST00000370606 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
ZIC3-202ENST00000370606 MAGI1Q96QZ7 1491 aaPredicted RBP28.98■■■□□ 2.23
ZIC3-202ENST00000370606 CEP162Q5TB80 1403 aa28.9■■■□□ 2.22
ZIC3-202ENST00000370606 RANGAP1P46060 587 aaPredicted RBP28.89■■■□□ 2.22
ZIC3-202ENST00000370606 SYNJ2O15056 1496 aa28.88■■■□□ 2.21
ZIC3-202ENST00000370606 FBLN2P98095 1184 aa28.88■■■□□ 2.21
ZIC3-202ENST00000370606 CHMP7Q8WUX9 453 aaPredicted RBP28.88■■■□□ 2.21
ZIC3-202ENST00000370606 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms