RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.77
CUL3-202ENST00000344951 EHMT2Q96KQ7 1210 aa24.79■■□□□ 1.56
CUL3-202ENST00000344951 SUPT5HO00267 1087 aaKnown RBP24.36■■□□□ 1.49
CUL3-202ENST00000344951 PELP1Q8IZL8 1130 aaKnown RBP24.04■■□□□ 1.44
CUL3-202ENST00000344951 TTBK1Q5TCY1 1321 aaPredicted RBP23.88■■□□□ 1.41
CUL3-202ENST00000344951 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
CUL3-202ENST00000344951 NISCHQ9Y2I1 1504 aa23.62■■□□□ 1.37
CUL3-202ENST00000344951 ERICH6Q7L0X2 663 aa23.62■■□□□ 1.37
CUL3-202ENST00000344951 APLP2Q06481 763 aa23.56■■□□□ 1.36
CUL3-202ENST00000344951 RANGAP1P46060 587 aaPredicted RBP23.49■■□□□ 1.35
CUL3-202ENST00000344951 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
CUL3-202ENST00000344951 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
CUL3-202ENST00000344951 PCGF6Q9BYE7 350 aa23.24■■□□□ 1.31
CUL3-202ENST00000344951 MYT1Q01538 1121 aa23.15■■□□□ 1.3
CUL3-202ENST00000344951 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
CUL3-202ENST00000344951 YTHDC1Q96MU7 727 aaKnown RBP22.92■■□□□ 1.26
CUL3-202ENST00000344951 CENPBP07199 599 aaPredicted RBP22.85■■□□□ 1.25
CUL3-202ENST00000344951 ZEB1P37275 1124 aaPredicted RBP22.69■■□□□ 1.22
CUL3-202ENST00000344951 NEFLP07196 543 aa22.64■■□□□ 1.21
CUL3-202ENST00000344951 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
CUL3-202ENST00000344951 CNGB1Q14028 1251 aaPredicted RBP22.62■■□□□ 1.21
CUL3-202ENST00000344951 POLR3GLQ9BT43 218 aa22.59■■□□□ 1.21
CUL3-202ENST00000344951 MYT1LQ9UL68 1186 aa22.58■■□□□ 1.2
CUL3-202ENST00000344951 PPARGC1BQ86YN6 1023 aaKnown RBP22.48■■□□□ 1.19
CUL3-202ENST00000344951 DAXXQ9UER7 740 aaPredicted RBP22.43■■□□□ 1.18
CUL3-202ENST00000344951 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
CUL3-202ENST00000344951 UBTFP17480 764 aaKnown RBP22.36■■□□□ 1.17
CUL3-202ENST00000344951 SLC4A1APQ9BWU0 796 aaKnown RBP22.3■■□□□ 1.16
CUL3-202ENST00000344951 ITGAEP38570 1179 aa22.21■■□□□ 1.15
CUL3-202ENST00000344951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
CUL3-202ENST00000344951 HNRNPUL2Q1KMD3 747 aaKnown RBP22.18■■□□□ 1.14
CUL3-202ENST00000344951 HRCP23327 699 aa22.14■■□□□ 1.14
CUL3-202ENST00000344951 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
CUL3-202ENST00000344951 BCL11AQ9H165 835 aa21.94■■□□□ 1.1
CUL3-202ENST00000344951 CLSPNQ9HAW4 1339 aa21.93■■□□□ 1.1
CUL3-202ENST00000344951 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.09
CUL3-202ENST00000344951 LOC105371045A0A1W2PR82 267 aa21.77■■□□□ 1.08
CUL3-202ENST00000344951 SLC24A1O60721 1099 aa21.76■■□□□ 1.07
CUL3-202ENST00000344951 RTL5Q5HYW3 569 aaPredicted RBP21.65■■□□□ 1.06
CUL3-202ENST00000344951 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
CUL3-202ENST00000344951 BCANQ96GW7 911 aa21.49■■□□□ 1.03
CUL3-202ENST00000344951 ZBTB47Q9UFB7 747 aaPredicted RBP21.36■■□□□ 1.01
CUL3-202ENST00000344951 ZNF326Q5BKZ1 582 aaKnown RBP21.34■■□□□ 1.01
CUL3-202ENST00000344951 GTF3C3Q9Y5Q9 886 aa21.32■■□□□ 1
CUL3-202ENST00000344951 TRIM52Q96A61 297 aa21.31■■□□□ 1
CUL3-202ENST00000344951 NEUROD1Q13562 356 aa21.28■■□□□ 1
CUL3-202ENST00000344951 FAM50AQ14320 339 aaKnown RBP21.27■■□□□ 1
CUL3-202ENST00000344951 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
CUL3-202ENST00000344951 CANXP27824 592 aaKnown RBP21.2■□□□□ 0.98
CUL3-202ENST00000344951 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
CUL3-202ENST00000344951 FBLN2P98095 1184 aa20.98■□□□□ 0.95
CUL3-202ENST00000344951 ARID3CA6NKF2 412 aa20.97■□□□□ 0.95
CUL3-202ENST00000344951 ACIN1Q9UKV3 1341 aaKnown RBP20.94■□□□□ 0.94
CUL3-202ENST00000344951 CDK11AQ9UQ88 783 aaPredicted RBP20.93■□□□□ 0.94
CUL3-202ENST00000344951 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
CUL3-202ENST00000344951 NEFMP07197 916 aa20.88■□□□□ 0.93
CUL3-202ENST00000344951 ANP32CO43423 234 aa20.84■□□□□ 0.93
CUL3-202ENST00000344951 A0A0G2JS52 829 aa20.84■□□□□ 0.93
CUL3-202ENST00000344951 ARXQ96QS3 562 aa20.84■□□□□ 0.93
CUL3-202ENST00000344951 PLEKHG5O94827 1062 aa20.8■□□□□ 0.92
CUL3-202ENST00000344951 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
CUL3-202ENST00000344951 HSP90AA1P07900 732 aaKnown RBP20.75■□□□□ 0.91
CUL3-202ENST00000344951 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
CUL3-202ENST00000344951 CHGAP10645 457 aaKnown RBP20.68■□□□□ 0.9
CUL3-202ENST00000344951 SALL2Q9Y467 1007 aaPredicted RBP20.67■□□□□ 0.9
CUL3-202ENST00000344951 TULP1O00294 542 aaPredicted RBP20.66■□□□□ 0.9
CUL3-202ENST00000344951 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.9
CUL3-202ENST00000344951 ANP32AP39687 249 aaKnown RBP20.64■□□□□ 0.89
CUL3-202ENST00000344951 ANP32BQ92688 251 aaKnown RBP20.63■□□□□ 0.89
CUL3-202ENST00000344951 P3H3Q8IVL6 736 aa20.62■□□□□ 0.89
CUL3-202ENST00000344951 STAG3Q9UJ98 1225 aa20.6■□□□□ 0.89
CUL3-202ENST00000344951 ESF1Q9H501 851 aaKnown RBP20.58■□□□□ 0.89
CUL3-202ENST00000344951 ZBTB7CA1YPR0 619 aa20.57■□□□□ 0.88
CUL3-202ENST00000344951 FKBP8Q14318 412 aa20.54■□□□□ 0.88
CUL3-202ENST00000344951 CDK11BP21127 795 aaKnown RBP20.49■□□□□ 0.87
CUL3-202ENST00000344951 NBR1Q14596 966 aa20.48■□□□□ 0.87
CUL3-202ENST00000344951 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
CUL3-202ENST00000344951 TPRNQ4KMQ1 711 aa20.44■□□□□ 0.86
CUL3-202ENST00000344951 NCBP3Q53F19 620 aaKnown RBP20.39■□□□□ 0.86
CUL3-202ENST00000344951 TAOK2Q9UL54 1235 aa20.36■□□□□ 0.85
CUL3-202ENST00000344951 FAM9BQ8IZU0 186 aa20.35■□□□□ 0.85
CUL3-202ENST00000344951 UPF2Q9HAU5 1272 aaKnown RBP20.34■□□□□ 0.85
CUL3-202ENST00000344951 C14orf37Q86TY3 774 aa20.31■□□□□ 0.84
CUL3-202ENST00000344951 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
CUL3-202ENST00000344951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.27■□□□□ 0.841e-6■■□□□ 11.6
CUL3-202ENST00000344951 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
CUL3-202ENST00000344951 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
CUL3-202ENST00000344951 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
CUL3-202ENST00000344951 SENP3-EIF4A1A0A087X0R7 540 aa20.2■□□□□ 0.82
CUL3-202ENST00000344951 IRX6P78412 446 aaPredicted RBP20.19■□□□□ 0.82
CUL3-202ENST00000344951 GLIPR1L2Q4G1C9 344 aa20.16■□□□□ 0.82
CUL3-202ENST00000344951 MIER1Q8N108 512 aa20.16■□□□□ 0.82
CUL3-202ENST00000344951 ABCC9O60706 1549 aa20.14■□□□□ 0.81
CUL3-202ENST00000344951 TONSLQ96HA7 1378 aa20.13■□□□□ 0.81
CUL3-202ENST00000344951 KDM2AQ9Y2K7 1162 aa20.12■□□□□ 0.81
CUL3-202ENST00000344951 NCLP19338 710 aaKnown RBP20.08■□□□□ 0.81
CUL3-202ENST00000344951 CCDC136Q96JN2 1154 aa20.08■□□□□ 0.8
CUL3-202ENST00000344951 HAP1P54257 671 aaPredicted RBP20.07■□□□□ 0.8
CUL3-202ENST00000344951 WDR43Q15061 677 aaKnown RBP eCLIP20.05■□□□□ 0.8
CUL3-202ENST00000344951 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms