Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST4Q8NFU0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 Z82202.1-201ENST00000623446 1880 ntBASIC17.12■□□□□ 0.33
BEST4Q8NFU0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.12■□□□□ 0.33
BEST4Q8NFU0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 MIR572-201ENST00000384983 95 ntBASIC17.11■□□□□ 0.33
BEST4Q8NFU0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 AC027682.1-201ENST00000562846 899 ntBASIC17.11■□□□□ 0.33
BEST4Q8NFU0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.11■□□□□ 0.33
BEST4Q8NFU0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BEST4Q8NFU0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 AC245052.3-201ENST00000450182 901 ntBASIC17.1■□□□□ 0.33
BEST4Q8NFU0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 RARRES2P11-201ENST00000635158 484 ntBASIC17.1■□□□□ 0.33
BEST4Q8NFU0 MIR2861-201ENST00000636310 90 ntBASIC17.1■□□□□ 0.33
BEST4Q8NFU0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 AC090340.1-201ENST00000620778 4980 ntBASIC17.1■□□□□ 0.33
BEST4Q8NFU0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms