RNA–Protein interactions for RNA: ENST00000435489.6

NIPAL4-202, Transcript of NIPA like domain containing 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NIPAL4, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4-202ENST00000435489 NISCHQ9Y2I1 1504 aa48.86■■■■■ 5.41
NIPAL4-202ENST00000435489 CCDC180Q9P1Z9 1646 aa43.28■■■■■ 4.52
NIPAL4-202ENST00000435489 ABCC9O60706 1549 aa42.36■■■■■ 4.37
NIPAL4-202ENST00000435489 DCAF8L2P0C7V8 631 aa40.9■■■■■ 4.14
NIPAL4-202ENST00000435489 RB1CC1Q8TDY2 1594 aa40.74■■■■■ 4.11
NIPAL4-202ENST00000435489 NACADO15069 1562 aa40.73■■■■■ 4.11
NIPAL4-202ENST00000435489 ZCCHC6Q5VYS8 1495 aaKnown RBP40.71■■■■■ 4.11
NIPAL4-202ENST00000435489 MYO15BQ96JP2 1530 aa40.53■■■■■ 4.08
NIPAL4-202ENST00000435489 DCAF1Q9Y4B6 1507 aa40.4■■■■■ 4.06
NIPAL4-202ENST00000435489 UNC13AQ9UPW8 1703 aa39.76■■■■□ 3.96
NIPAL4-202ENST00000435489 PABPN1Q86U42 306 aaKnown RBP eCLIP39.67■■■■□ 3.94
NIPAL4-202ENST00000435489 SCRIBQ14160 1630 aa39.57■■■■□ 3.92
NIPAL4-202ENST00000435489 BICRAQ9NZM4 1560 aa39.52■■■■□ 3.92
NIPAL4-202ENST00000435489 SHROOM4Q9ULL8 1493 aa39.07■■■■□ 3.85
NIPAL4-202ENST00000435489 DNAJC5BQ9UF47 199 aa38.85■■■■□ 3.81
NIPAL4-202ENST00000435489 EIF4G1Q04637 1599 aaKnown RBP38.47■■■■□ 3.75
NIPAL4-202ENST00000435489 CC2D2AQ9P2K1 1620 aa38.28■■■■□ 3.72
NIPAL4-202ENST00000435489 CECR2Q9BXF3 1484 aa38.08■■■■□ 3.69
NIPAL4-202ENST00000435489 SMARCA4P51532 1647 aa37.85■■■■□ 3.65
NIPAL4-202ENST00000435489 BAZ1AQ9NRL2 1556 aaPredicted RBP37.84■■■■□ 3.65
NIPAL4-202ENST00000435489 MROH2BQ7Z745 1585 aa37.67■■■■□ 3.62
NIPAL4-202ENST00000435489 ATAD2BQ9ULI0 1458 aa37.66■■■■□ 3.62
NIPAL4-202ENST00000435489 NCAPD3P42695 1498 aa37.63■■■■□ 3.61
NIPAL4-202ENST00000435489 SMARCA2P51531 1590 aa37.59■■■■□ 3.61
NIPAL4-202ENST00000435489 PEG3Q9GZU2 1588 aa37.47■■■■□ 3.59
NIPAL4-202ENST00000435489 HMGXB3Q12766 1538 aa37.4■■■■□ 3.58
NIPAL4-202ENST00000435489 BAZ1BQ9UIG0 1483 aaKnown RBP37.34■■■■□ 3.57
NIPAL4-202ENST00000435489 RSF1Q96T23 1441 aaPredicted RBP37.31■■■■□ 3.56
NIPAL4-202ENST00000435489 WIZO95785 1651 aa37.24■■■■□ 3.55
NIPAL4-202ENST00000435489 TOP2AP11388 1531 aaKnown RBP36.83■■■■□ 3.49
NIPAL4-202ENST00000435489 NESP48681 1621 aa36.69■■■■□ 3.46
NIPAL4-202ENST00000435489 LAMC3Q9Y6N6 1575 aa36.57■■■■□ 3.44
NIPAL4-202ENST00000435489 CADPSQ9ULU8 1353 aa36.56■■■■□ 3.44
NIPAL4-202ENST00000435489 SUPT5HO00267 1087 aaKnown RBP36.54■■■■□ 3.44
NIPAL4-202ENST00000435489 ERCC6Q03468 1493 aa36.49■■■■□ 3.43
NIPAL4-202ENST00000435489 CCDC88BA6NC98 1476 aa36.47■■■■□ 3.43
NIPAL4-202ENST00000435489 PDS5BQ9NTI5 1447 aa36.37■■■■□ 3.41
NIPAL4-202ENST00000435489 CFTRP13569 1480 aa36.35■■■■□ 3.41
NIPAL4-202ENST00000435489 KIF21AQ7Z4S6 1674 aa36.18■■■■□ 3.38
NIPAL4-202ENST00000435489 FANCD2Q9BXW9 1451 aa36.12■■■■□ 3.37
NIPAL4-202ENST00000435489 CEP164Q9UPV0 1460 aa36.04■■■■□ 3.36
NIPAL4-202ENST00000435489 THOC2Q8NI27 1593 aaKnown RBP36.03■■■■□ 3.36
NIPAL4-202ENST00000435489 CUX2O14529 1486 aa36.03■■■■□ 3.36
NIPAL4-202ENST00000435489 MRC2Q9UBG0 1479 aa35.95■■■■□ 3.35
NIPAL4-202ENST00000435489 PRDM2Q13029 1718 aa35.94■■■■□ 3.34
NIPAL4-202ENST00000435489 WDR62O43379 1518 aa35.81■■■■□ 3.32
NIPAL4-202ENST00000435489 URB2Q14146 1524 aaKnown RBP35.74■■■■□ 3.31
NIPAL4-202ENST00000435489 TOPBP1Q92547 1522 aa35.54■■■■□ 3.28
NIPAL4-202ENST00000435489 ABCC8Q09428 1581 aa35.54■■■■□ 3.28
NIPAL4-202ENST00000435489 DNMBPQ6XZF7 1577 aa35.48■■■■□ 3.27
NIPAL4-202ENST00000435489 CUX1P39880 1505 aa35.32■■■■□ 3.24
NIPAL4-202ENST00000435489 IFT140Q96RY7 1462 aa35.28■■■■□ 3.24
NIPAL4-202ENST00000435489 POLA1P09884 1462 aaPredicted RBP35.25■■■■□ 3.23
NIPAL4-202ENST00000435489 FGD5Q6ZNL6 1462 aa35.18■■■■□ 3.22
NIPAL4-202ENST00000435489 WRNQ14191 1432 aaPredicted RBP eCLIP35.16■■■■□ 3.22
NIPAL4-202ENST00000435489 SOGA1O94964 1423 aa35.15■■■■□ 3.22
NIPAL4-202ENST00000435489 ZNF608Q9ULD9 1512 aaPredicted RBP35.13■■■■□ 3.22
NIPAL4-202ENST00000435489 RAD54L2Q9Y4B4 1467 aa35.13■■■■□ 3.21
NIPAL4-202ENST00000435489 TARBP1Q13395 1621 aaKnown RBP35.12■■■■□ 3.21
NIPAL4-202ENST00000435489 SYNJ1O43426 1573 aa35.02■■■■□ 3.2
NIPAL4-202ENST00000435489 TOP2BQ02880 1626 aa35.02■■■■□ 3.2
NIPAL4-202ENST00000435489 BIVM-ERCC5R4GMW8 1640 aa34.99■■■■□ 3.19
NIPAL4-202ENST00000435489 AQRO60306 1485 aaKnown RBP eCLIP34.98■■■■□ 3.19
NIPAL4-202ENST00000435489 TDRD9Q8NDG6 1382 aaKnown RBP34.95■■■■□ 3.19
NIPAL4-202ENST00000435489 EIF4G3O43432 1585 aaKnown RBP34.93■■■■□ 3.18
NIPAL4-202ENST00000435489 DNAJC5Q9H3Z4 198 aa34.87■■■■□ 3.17
NIPAL4-202ENST00000435489 ABCA10Q8WWZ4 1543 aa34.85■■■■□ 3.17
NIPAL4-202ENST00000435489 WDR97A6NE52 1622 aa34.8■■■■□ 3.16
NIPAL4-202ENST00000435489 CHIC1Q5VXU3 224 aa34.77■■■■□ 3.16
NIPAL4-202ENST00000435489 GAPVD1Q14C86 1478 aa34.72■■■■□ 3.15
NIPAL4-202ENST00000435489 GRIN2BQ13224 1484 aa34.68■■■■□ 3.14
NIPAL4-202ENST00000435489 OSCARQ8IYS5 282 aa34.66■■■■□ 3.14
NIPAL4-202ENST00000435489 ABCA5Q8WWZ7 1642 aa34.65■■■■□ 3.14
NIPAL4-202ENST00000435489 SNAPC4Q5SXM2 1469 aa34.62■■■■□ 3.13
NIPAL4-202ENST00000435489 FBLN2P98095 1184 aa34.59■■■■□ 3.13
NIPAL4-202ENST00000435489 MAGI1Q96QZ7 1491 aaPredicted RBP34.56■■■■□ 3.12
NIPAL4-202ENST00000435489 PBRM1Q86U86 1689 aa34.54■■■■□ 3.12
NIPAL4-202ENST00000435489 CHMP7Q8WUX9 453 aaPredicted RBP34.49■■■■□ 3.11
NIPAL4-202ENST00000435489 TRIM41Q8WV44 630 aa34.48■■■■□ 3.11
NIPAL4-202ENST00000435489 CHD1O14646 1710 aa34.45■■■■□ 3.11
NIPAL4-202ENST00000435489 SYNJ2O15056 1496 aa34.44■■■■□ 3.1
NIPAL4-202ENST00000435489 KIF27Q86VH2 1401 aa34.42■■■■□ 3.1
NIPAL4-202ENST00000435489 ERICH3Q5RHP9 1530 aa34.41■■■■□ 3.1
NIPAL4-202ENST00000435489 FHAD1B1AJZ9 1412 aa34.32■■■■□ 3.08
NIPAL4-202ENST00000435489 ADAMTS12P58397 1594 aa34.31■■■■□ 3.08
NIPAL4-202ENST00000435489 IGF1RP08069 1367 aa34.3■■■■□ 3.08
NIPAL4-202ENST00000435489 GRIN2AQ12879 1464 aa34.24■■■■□ 3.07
NIPAL4-202ENST00000435489 RUSC2Q8N2Y8 1516 aa34.17■■■■□ 3.06
NIPAL4-202ENST00000435489 CLASP1Q7Z460 1538 aa34.12■■■■□ 3.05
NIPAL4-202ENST00000435489 CARMIL1Q5VZK9 1371 aa34.09■■■■□ 3.05
NIPAL4-202ENST00000435489 CUL7Q14999 1698 aa34.08■■■■□ 3.05
NIPAL4-202ENST00000435489 NUP160Q12769 1436 aa34.08■■■■□ 3.05
NIPAL4-202ENST00000435489 CEP170Q5SW79 1584 aa34.04■■■■□ 3.04
NIPAL4-202ENST00000435489 ARHGEF11O15085 1522 aa34.01■■■■□ 3.04
NIPAL4-202ENST00000435489 RIMBP3CA6NJZ7 1639 aa33.98■■■■□ 3.03
NIPAL4-202ENST00000435489 RIMBP3BA6NNM3 1639 aa33.98■■■■□ 3.03
NIPAL4-202ENST00000435489 RIMBP3Q9UFD9 1639 aa33.98■■■■□ 3.03
NIPAL4-202ENST00000435489 RAPGEF2Q9Y4G8 1499 aa33.87■■■■□ 3.01
NIPAL4-202ENST00000435489 CSRNP3Q8WYN3 585 aa33.84■■■■□ 3.01
NIPAL4-202ENST00000435489 JPH4Q96JJ6 628 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms