RNA–Protein interactions for RNA: ENST00000389425.7

SEMA6D-205, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 2,318 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-205ENST00000389425 NISCHQ9Y2I1 1504 aa37.12■■■■□ 3.53
SEMA6D-205ENST00000389425 CCDC180Q9P1Z9 1646 aa32.2■■■□□ 2.74
SEMA6D-205ENST00000389425 ZCCHC6Q5VYS8 1495 aaKnown RBP31.28■■■□□ 2.6
SEMA6D-205ENST00000389425 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.6
SEMA6D-205ENST00000389425 SUPT5HO00267 1087 aaKnown RBP31■■■□□ 2.55
SEMA6D-205ENST00000389425 HRCP23327 699 aa30.77■■■□□ 2.52
SEMA6D-205ENST00000389425 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
SEMA6D-205ENST00000389425 CHIC1Q5VXU3 224 aa30.58■■■□□ 2.49
SEMA6D-205ENST00000389425 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
SEMA6D-205ENST00000389425 DCAF8L2P0C7V8 631 aa30.56■■■□□ 2.48
SEMA6D-205ENST00000389425 PCGF6Q9BYE7 350 aa30.19■■■□□ 2.42
SEMA6D-205ENST00000389425 ABCC9O60706 1549 aa30.08■■■□□ 2.41
SEMA6D-205ENST00000389425 PPARGC1BQ86YN6 1023 aaKnown RBP29.85■■■□□ 2.37
SEMA6D-205ENST00000389425 NACADO15069 1562 aa29.82■■■□□ 2.36
SEMA6D-205ENST00000389425 SCRIBQ14160 1630 aa29.75■■■□□ 2.35
SEMA6D-205ENST00000389425 LOC105371045A0A1W2PR82 267 aa29.6■■■□□ 2.33
SEMA6D-205ENST00000389425 TRIM26Q12899 539 aaPredicted RBP29.6■■■□□ 2.33
SEMA6D-205ENST00000389425 RB1CC1Q8TDY2 1594 aa29.49■■■□□ 2.31
SEMA6D-205ENST00000389425 ZEB1P37275 1124 aaPredicted RBP29.33■■■□□ 2.29
SEMA6D-205ENST00000389425 UNC13AQ9UPW8 1703 aa29.1■■■□□ 2.25
SEMA6D-205ENST00000389425 PELP1Q8IZL8 1130 aaKnown RBP29.09■■■□□ 2.25
SEMA6D-205ENST00000389425 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.24
SEMA6D-205ENST00000389425 TRIM41Q8WV44 630 aa28.91■■■□□ 2.22
SEMA6D-205ENST00000389425 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
SEMA6D-205ENST00000389425 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
SEMA6D-205ENST00000389425 SCAF1Q9H7N4 1312 aaKnown RBP28.69■■■□□ 2.18
SEMA6D-205ENST00000389425 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
SEMA6D-205ENST00000389425 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
SEMA6D-205ENST00000389425 WIZO95785 1651 aa28.61■■■□□ 2.17
SEMA6D-205ENST00000389425 FAM9AQ8IZU1 332 aaPredicted RBP28.58■■■□□ 2.17
SEMA6D-205ENST00000389425 SMARCA4P51532 1647 aa28.5■■■□□ 2.15
SEMA6D-205ENST00000389425 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
SEMA6D-205ENST00000389425 ACIN1Q9UKV3 1341 aaKnown RBP28.26■■■□□ 2.12
SEMA6D-205ENST00000389425 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
SEMA6D-205ENST00000389425 EHMT2Q96KQ7 1210 aa28.21■■■□□ 2.11
SEMA6D-205ENST00000389425 CCER1Q8TC90 406 aaPredicted RBP28.17■■■□□ 2.1
SEMA6D-205ENST00000389425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.15■■■□□ 2.1
SEMA6D-205ENST00000389425 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
SEMA6D-205ENST00000389425 NEUROD1Q13562 356 aa28.09■■■□□ 2.09
SEMA6D-205ENST00000389425 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
SEMA6D-205ENST00000389425 PEG3Q9GZU2 1588 aa28.06■■■□□ 2.08
SEMA6D-205ENST00000389425 CENPBP07199 599 aaPredicted RBP28.02■■■□□ 2.08
SEMA6D-205ENST00000389425 DIEXFQ68CQ4 756 aaKnown RBP28.02■■■□□ 2.08
SEMA6D-205ENST00000389425 SMARCA2P51531 1590 aa28.02■■■□□ 2.08
SEMA6D-205ENST00000389425 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.06
SEMA6D-205ENST00000389425 MYT1Q01538 1121 aa27.88■■■□□ 2.05
SEMA6D-205ENST00000389425 GTF3C3Q9Y5Q9 886 aa27.88■■■□□ 2.05
SEMA6D-205ENST00000389425 ATAD2BQ9ULI0 1458 aa27.85■■■□□ 2.05
SEMA6D-205ENST00000389425 CEP162Q5TB80 1403 aa27.81■■■□□ 2.04
SEMA6D-205ENST00000389425 TNIKQ9UKE5 1360 aa27.78■■■□□ 2.04
SEMA6D-205ENST00000389425 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
SEMA6D-205ENST00000389425 EEA1Q15075 1411 aa27.71■■■□□ 2.03
SEMA6D-205ENST00000389425 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
SEMA6D-205ENST00000389425 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
SEMA6D-205ENST00000389425 SOGA1O94964 1423 aa27.59■■■□□ 2.01
SEMA6D-205ENST00000389425 CSRNP3Q8WYN3 585 aa27.55■■■□□ 2
SEMA6D-205ENST00000389425 HMGXB3Q12766 1538 aa27.54■■■□□ 2
SEMA6D-205ENST00000389425 TTBK1Q5TCY1 1321 aaPredicted RBP27.5■■□□□ 1.99
SEMA6D-205ENST00000389425 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
SEMA6D-205ENST00000389425 GOLGA3Q08378 1498 aa27.47■■□□□ 1.99
SEMA6D-205ENST00000389425 UBTFP17480 764 aaKnown RBP27.42■■□□□ 1.98
SEMA6D-205ENST00000389425 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.98
SEMA6D-205ENST00000389425 MIER1Q8N108 512 aa27.3■■□□□ 1.96
SEMA6D-205ENST00000389425 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.95
SEMA6D-205ENST00000389425 YTHDC1Q96MU7 727 aaKnown RBP27.25■■□□□ 1.95
SEMA6D-205ENST00000389425 KIF21BO75037 1637 aa27.25■■□□□ 1.95
SEMA6D-205ENST00000389425 CC2D2AQ9P2K1 1620 aa27.24■■□□□ 1.95
SEMA6D-205ENST00000389425 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
SEMA6D-205ENST00000389425 CLIP1P30622 1438 aa27.16■■□□□ 1.94
SEMA6D-205ENST00000389425 VPS8Q8N3P4 1428 aa27.16■■□□□ 1.94
SEMA6D-205ENST00000389425 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
SEMA6D-205ENST00000389425 PRDM2Q13029 1718 aa27.09■■□□□ 1.93
SEMA6D-205ENST00000389425 CLSPNQ9HAW4 1339 aa27.07■■□□□ 1.92
SEMA6D-205ENST00000389425 CFTRP13569 1480 aa27.03■■□□□ 1.92
SEMA6D-205ENST00000389425 TOP2BQ02880 1626 aa27.02■■□□□ 1.92
SEMA6D-205ENST00000389425 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
SEMA6D-205ENST00000389425 APLP2Q06481 763 aa27■■□□□ 1.91
SEMA6D-205ENST00000389425 RAPGEF2Q9Y4G8 1499 aa26.9■■□□□ 1.9
SEMA6D-205ENST00000389425 CUX1P39880 1505 aa26.85■■□□□ 1.89
SEMA6D-205ENST00000389425 DHX57Q6P158 1386 aaKnown RBP26.85■■□□□ 1.89
SEMA6D-205ENST00000389425 CADPSQ9ULU8 1353 aa26.83■■□□□ 1.89
SEMA6D-205ENST00000389425 SUPT16HQ9Y5B9 1047 aaKnown RBP26.74■■□□□ 1.87
SEMA6D-205ENST00000389425 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
SEMA6D-205ENST00000389425 CUX2O14529 1486 aa26.66■■□□□ 1.86
SEMA6D-205ENST00000389425 RRBP1Q9P2E9 1410 aaKnown RBP26.66■■□□□ 1.86
SEMA6D-205ENST00000389425 ARAP1Q96P48 1450 aa26.65■■□□□ 1.86
SEMA6D-205ENST00000389425 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
SEMA6D-205ENST00000389425 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
SEMA6D-205ENST00000389425 NESP48681 1621 aa26.57■■□□□ 1.84
SEMA6D-205ENST00000389425 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
SEMA6D-205ENST00000389425 KANK4Q5T7N3 995 aaPredicted RBP26.54■■□□□ 1.84
SEMA6D-205ENST00000389425 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
SEMA6D-205ENST00000389425 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
SEMA6D-205ENST00000389425 TSHZ2Q9NRE2 1034 aa26.49■■□□□ 1.83
SEMA6D-205ENST00000389425 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
SEMA6D-205ENST00000389425 CCNB3Q8WWL7 1395 aa26.46■■□□□ 1.83
SEMA6D-205ENST00000389425 DNMBPQ6XZF7 1577 aa26.45■■□□□ 1.83
SEMA6D-205ENST00000389425 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
SEMA6D-205ENST00000389425 TOPBP1Q92547 1522 aa26.36■■□□□ 1.81
SEMA6D-205ENST00000389425 ANP32EQ9BTT0 268 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms