RNA–Protein interactions for RNA: ENST00000372207.3

BEST4-201, Transcript of bestrophin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST4, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4-201ENST00000372207 NISCHQ9Y2I1 1504 aa44.2■■■■■ 4.67
BEST4-201ENST00000372207 CCDC180Q9P1Z9 1646 aa38.22■■■■□ 3.71
BEST4-201ENST00000372207 ZCCHC6Q5VYS8 1495 aaKnown RBP37.16■■■■□ 3.54
BEST4-201ENST00000372207 DCAF8L2P0C7V8 631 aa36.66■■■■□ 3.46
BEST4-201ENST00000372207 DCAF1Q9Y4B6 1507 aa36.46■■■■□ 3.43
BEST4-201ENST00000372207 SHROOM4Q9ULL8 1493 aa36.44■■■■□ 3.42
BEST4-201ENST00000372207 ABCC9O60706 1549 aa36.16■■■■□ 3.38
BEST4-201ENST00000372207 MYO15BQ96JP2 1530 aa35.92■■■■□ 3.34
BEST4-201ENST00000372207 NACADO15069 1562 aa35.64■■■■□ 3.3
BEST4-201ENST00000372207 SCRIBQ14160 1630 aa35.36■■■■□ 3.25
BEST4-201ENST00000372207 RB1CC1Q8TDY2 1594 aa35.27■■■■□ 3.24
BEST4-201ENST00000372207 SUPT5HO00267 1087 aaKnown RBP35.23■■■■□ 3.23
BEST4-201ENST00000372207 UNC13AQ9UPW8 1703 aa34.48■■■■□ 3.11
BEST4-201ENST00000372207 RSF1Q96T23 1441 aaPredicted RBP34.47■■■■□ 3.11
BEST4-201ENST00000372207 CECR2Q9BXF3 1484 aa34.41■■■■□ 3.1
BEST4-201ENST00000372207 PABPN1Q86U42 306 aaKnown RBP eCLIP34.28■■■■□ 3.08
BEST4-201ENST00000372207 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
BEST4-201ENST00000372207 MROH2BQ7Z745 1585 aa34.19■■■■□ 3.06
BEST4-201ENST00000372207 BAZ1AQ9NRL2 1556 aaPredicted RBP34.07■■■■□ 3.04
BEST4-201ENST00000372207 WIZO95785 1651 aa33.87■■■■□ 3.01
BEST4-201ENST00000372207 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
BEST4-201ENST00000372207 CHIC1Q5VXU3 224 aa33.82■■■■□ 3.01
BEST4-201ENST00000372207 TOP2AP11388 1531 aaKnown RBP33.51■■■□□ 2.95
BEST4-201ENST00000372207 PEG3Q9GZU2 1588 aa33.42■■■□□ 2.94
BEST4-201ENST00000372207 ATAD2BQ9ULI0 1458 aa33.32■■■□□ 2.93
BEST4-201ENST00000372207 CCDC88BA6NC98 1476 aa33.26■■■□□ 2.92
BEST4-201ENST00000372207 SMARCA2P51531 1590 aa33.23■■■□□ 2.91
BEST4-201ENST00000372207 EIF4G1Q04637 1599 aaKnown RBP33.2■■■□□ 2.9
BEST4-201ENST00000372207 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
BEST4-201ENST00000372207 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
BEST4-201ENST00000372207 NCAPD3P42695 1498 aa32.98■■■□□ 2.87
BEST4-201ENST00000372207 HMGXB3Q12766 1538 aa32.86■■■□□ 2.85
BEST4-201ENST00000372207 ABCC8Q09428 1581 aa32.65■■■□□ 2.82
BEST4-201ENST00000372207 CC2D2AQ9P2K1 1620 aa32.63■■■□□ 2.81
BEST4-201ENST00000372207 LOC105371045A0A1W2PR82 267 aa32.61■■■□□ 2.81
BEST4-201ENST00000372207 FAM9AQ8IZU1 332 aaPredicted RBP32.53■■■□□ 2.8
BEST4-201ENST00000372207 WRNQ14191 1432 aaPredicted RBP eCLIP32.42■■■□□ 2.78
BEST4-201ENST00000372207 CFTRP13569 1480 aa32.33■■■□□ 2.77
BEST4-201ENST00000372207 SYNJ1O43426 1573 aa32.22■■■□□ 2.75
BEST4-201ENST00000372207 CADPSQ9ULU8 1353 aa32.2■■■□□ 2.75
BEST4-201ENST00000372207 SOGA1O94964 1423 aa32.16■■■□□ 2.74
BEST4-201ENST00000372207 EHMT2Q96KQ7 1210 aa32.11■■■□□ 2.73
BEST4-201ENST00000372207 EEA1Q15075 1411 aa32.03■■■□□ 2.72
BEST4-201ENST00000372207 TOP2BQ02880 1626 aa32.03■■■□□ 2.72
BEST4-201ENST00000372207 RUSC2Q8N2Y8 1516 aa32.02■■■□□ 2.72
BEST4-201ENST00000372207 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
BEST4-201ENST00000372207 CSRNP3Q8WYN3 585 aa31.97■■■□□ 2.71
BEST4-201ENST00000372207 CUX1P39880 1505 aa31.93■■■□□ 2.7
BEST4-201ENST00000372207 BIVM-ERCC5R4GMW8 1640 aa31.92■■■□□ 2.7
BEST4-201ENST00000372207 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
BEST4-201ENST00000372207 NESP48681 1621 aa31.83■■■□□ 2.69
BEST4-201ENST00000372207 FANCD2Q9BXW9 1451 aa31.82■■■□□ 2.68
BEST4-201ENST00000372207 LAMC3Q9Y6N6 1575 aa31.72■■■□□ 2.67
BEST4-201ENST00000372207 GOLGA3Q08378 1498 aa31.63■■■□□ 2.65
BEST4-201ENST00000372207 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
BEST4-201ENST00000372207 UBTFP17480 764 aaKnown RBP31.63■■■□□ 2.65
BEST4-201ENST00000372207 CEP164Q9UPV0 1460 aa31.61■■■□□ 2.65
BEST4-201ENST00000372207 KIF27Q86VH2 1401 aa31.57■■■□□ 2.64
BEST4-201ENST00000372207 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
BEST4-201ENST00000372207 FGD5Q6ZNL6 1462 aa31.55■■■□□ 2.64
BEST4-201ENST00000372207 KIF21BO75037 1637 aa31.55■■■□□ 2.64
BEST4-201ENST00000372207 DNMBPQ6XZF7 1577 aa31.49■■■□□ 2.63
BEST4-201ENST00000372207 CEP162Q5TB80 1403 aa31.49■■■□□ 2.63
BEST4-201ENST00000372207 TOPBP1Q92547 1522 aa31.48■■■□□ 2.63
BEST4-201ENST00000372207 RAPGEF2Q9Y4G8 1499 aa31.46■■■□□ 2.63
BEST4-201ENST00000372207 CUX2O14529 1486 aa31.43■■■□□ 2.62
BEST4-201ENST00000372207 PRXQ9BXM0 1461 aa31.42■■■□□ 2.62
BEST4-201ENST00000372207 PCGF6Q9BYE7 350 aa31.41■■■□□ 2.62
BEST4-201ENST00000372207 URB2Q14146 1524 aaKnown RBP31.4■■■□□ 2.62
BEST4-201ENST00000372207 POLA1P09884 1462 aaPredicted RBP31.37■■■□□ 2.61
BEST4-201ENST00000372207 IGF1RP08069 1367 aa31.32■■■□□ 2.6
BEST4-201ENST00000372207 RAD54L2Q9Y4B4 1467 aa31.32■■■□□ 2.6
BEST4-201ENST00000372207 ERICH3Q5RHP9 1530 aa31.31■■■□□ 2.6
BEST4-201ENST00000372207 KIF21AQ7Z4S6 1674 aa31.29■■■□□ 2.6
BEST4-201ENST00000372207 TRIM26Q12899 539 aaPredicted RBP31.26■■■□□ 2.59
BEST4-201ENST00000372207 ABCA10Q8WWZ4 1543 aa31.26■■■□□ 2.59
BEST4-201ENST00000372207 CLIP1P30622 1438 aa31.19■■■□□ 2.58
BEST4-201ENST00000372207 CARMIL1Q5VZK9 1371 aa31.15■■■□□ 2.58
BEST4-201ENST00000372207 MRC2Q9UBG0 1479 aa31.11■■■□□ 2.57
BEST4-201ENST00000372207 RANGAP1P46060 587 aaPredicted RBP31.1■■■□□ 2.57
BEST4-201ENST00000372207 PPARGC1BQ86YN6 1023 aaKnown RBP31.09■■■□□ 2.57
BEST4-201ENST00000372207 TDRD9Q8NDG6 1382 aaKnown RBP31.04■■■□□ 2.56
BEST4-201ENST00000372207 WDR97A6NE52 1622 aa30.99■■■□□ 2.55
BEST4-201ENST00000372207 ERCC6Q03468 1493 aa30.95■■■□□ 2.55
BEST4-201ENST00000372207 GAPVD1Q14C86 1478 aa30.94■■■□□ 2.54
BEST4-201ENST00000372207 TARBP1Q13395 1621 aaKnown RBP30.93■■■□□ 2.54
BEST4-201ENST00000372207 VPS8Q8N3P4 1428 aa30.93■■■□□ 2.54
BEST4-201ENST00000372207 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
BEST4-201ENST00000372207 WDR62O43379 1518 aa30.9■■■□□ 2.54
BEST4-201ENST00000372207 CUL7Q14999 1698 aa30.85■■■□□ 2.53
BEST4-201ENST00000372207 ARAP1Q96P48 1450 aa30.81■■■□□ 2.52
BEST4-201ENST00000372207 TTBK1Q5TCY1 1321 aaPredicted RBP30.78■■■□□ 2.52
BEST4-201ENST00000372207 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
BEST4-201ENST00000372207 AQRO60306 1485 aaKnown RBP eCLIP30.77■■■□□ 2.52
BEST4-201ENST00000372207 ARHGAP35Q9NRY4 1499 aa30.77■■■□□ 2.52
BEST4-201ENST00000372207 APLP2Q06481 763 aa30.71■■■□□ 2.51
BEST4-201ENST00000372207 THOC2Q8NI27 1593 aaKnown RBP30.7■■■□□ 2.51
BEST4-201ENST00000372207 ZNF608Q9ULD9 1512 aaPredicted RBP30.68■■■□□ 2.5
BEST4-201ENST00000372207 HRCP23327 699 aa30.66■■■□□ 2.5
BEST4-201ENST00000372207 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms