RNA–Protein interactions for RNA: ENST00000369756.3

FAM46A-203, Transcript of Putative nucleotidyltransferase FAM46A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM46A, Length 5,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46A-203ENST00000369756 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
FAM46A-203ENST00000369756 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
FAM46A-203ENST00000369756 SUPT5HO00267 1087 aaKnown RBP30.48■■■□□ 2.47
FAM46A-203ENST00000369756 SHROOM4Q9ULL8 1493 aa30.08■■■□□ 2.41
FAM46A-203ENST00000369756 EHMT2Q96KQ7 1210 aa29.07■■■□□ 2.24
FAM46A-203ENST00000369756 APLP2Q06481 763 aa28.77■■■□□ 2.2
FAM46A-203ENST00000369756 PELP1Q8IZL8 1130 aaKnown RBP28.73■■■□□ 2.19
FAM46A-203ENST00000369756 PCGF6Q9BYE7 350 aa28.67■■■□□ 2.18
FAM46A-203ENST00000369756 FAM9AQ8IZU1 332 aaPredicted RBP28.62■■■□□ 2.17
FAM46A-203ENST00000369756 ZEB1P37275 1124 aaPredicted RBP28.43■■■□□ 2.14
FAM46A-203ENST00000369756 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
FAM46A-203ENST00000369756 TTBK1Q5TCY1 1321 aaPredicted RBP28.19■■■□□ 2.1
FAM46A-203ENST00000369756 CENPBP07199 599 aaPredicted RBP28.06■■■□□ 2.08
FAM46A-203ENST00000369756 CCER1Q8TC90 406 aaPredicted RBP28.04■■■□□ 2.08
FAM46A-203ENST00000369756 UBTFP17480 764 aaKnown RBP27.84■■■□□ 2.05
FAM46A-203ENST00000369756 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
FAM46A-203ENST00000369756 TRIM26Q12899 539 aaPredicted RBP27.73■■■□□ 2.03
FAM46A-203ENST00000369756 HRCP23327 699 aa27.58■■■□□ 2.01
FAM46A-203ENST00000369756 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
FAM46A-203ENST00000369756 ATP1B4Q9UN42 357 aaPredicted RBP27.53■■■□□ 2
FAM46A-203ENST00000369756 ERICH6Q7L0X2 663 aa27.37■■□□□ 1.97
FAM46A-203ENST00000369756 PPARGC1BQ86YN6 1023 aaKnown RBP27.36■■□□□ 1.97
FAM46A-203ENST00000369756 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
FAM46A-203ENST00000369756 YTHDC1Q96MU7 727 aaKnown RBP27.27■■□□□ 1.96
FAM46A-203ENST00000369756 NEFLP07196 543 aa27.25■■□□□ 1.95
FAM46A-203ENST00000369756 MYT1Q01538 1121 aa27.14■■□□□ 1.93
FAM46A-203ENST00000369756 HNRNPUL2Q1KMD3 747 aaKnown RBP26.85■■□□□ 1.89
FAM46A-203ENST00000369756 ITGAEP38570 1179 aa26.81■■□□□ 1.88
FAM46A-203ENST00000369756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.67■■□□□ 1.86
FAM46A-203ENST00000369756 ABCC9O60706 1549 aa26.64■■□□□ 1.85
FAM46A-203ENST00000369756 DIEXFQ68CQ4 756 aaKnown RBP26.61■■□□□ 1.85
FAM46A-203ENST00000369756 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
FAM46A-203ENST00000369756 POLR3GLQ9BT43 218 aa26.39■■□□□ 1.82
FAM46A-203ENST00000369756 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
FAM46A-203ENST00000369756 FAM50AQ14320 339 aaKnown RBP26.3■■□□□ 1.8
FAM46A-203ENST00000369756 DAXXQ9UER7 740 aaPredicted RBP26.24■■□□□ 1.79
FAM46A-203ENST00000369756 MYT1LQ9UL68 1186 aa26.24■■□□□ 1.79
FAM46A-203ENST00000369756 CCDC180Q9P1Z9 1646 aa26.16■■□□□ 1.78
FAM46A-203ENST00000369756 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
FAM46A-203ENST00000369756 ZNF316A6NFI3 1004 aaPredicted RBP26.11■■□□□ 1.77
FAM46A-203ENST00000369756 CSRNP3Q8WYN3 585 aa26.1■■□□□ 1.77
FAM46A-203ENST00000369756 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
FAM46A-203ENST00000369756 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
FAM46A-203ENST00000369756 NEUROD1Q13562 356 aa26.06■■□□□ 1.76
FAM46A-203ENST00000369756 CNGB1Q14028 1251 aaPredicted RBP26.04■■□□□ 1.76
FAM46A-203ENST00000369756 GTF3C3Q9Y5Q9 886 aa26.03■■□□□ 1.76
FAM46A-203ENST00000369756 ANP32CO43423 234 aa25.95■■□□□ 1.75
FAM46A-203ENST00000369756 ACIN1Q9UKV3 1341 aaKnown RBP25.85■■□□□ 1.73
FAM46A-203ENST00000369756 RTL5Q5HYW3 569 aaPredicted RBP25.8■■□□□ 1.72
FAM46A-203ENST00000369756 SLC4A1APQ9BWU0 796 aaKnown RBP25.75■■□□□ 1.71
FAM46A-203ENST00000369756 BCANQ96GW7 911 aa25.72■■□□□ 1.71
FAM46A-203ENST00000369756 CLSPNQ9HAW4 1339 aa25.67■■□□□ 1.7
FAM46A-203ENST00000369756 CDK11AQ9UQ88 783 aaPredicted RBP25.67■■□□□ 1.7
FAM46A-203ENST00000369756 ZNF326Q5BKZ1 582 aaKnown RBP25.64■■□□□ 1.69
FAM46A-203ENST00000369756 P3H3Q8IVL6 736 aa25.63■■□□□ 1.69
FAM46A-203ENST00000369756 MYO15BQ96JP2 1530 aa25.5■■□□□ 1.67
FAM46A-203ENST00000369756 FBLN2P98095 1184 aa25.49■■□□□ 1.67
FAM46A-203ENST00000369756 TONSLQ96HA7 1378 aa25.43■■□□□ 1.66
FAM46A-203ENST00000369756 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
FAM46A-203ENST00000369756 EEA1Q15075 1411 aa25.38■■□□□ 1.65
FAM46A-203ENST00000369756 RB1CC1Q8TDY2 1594 aa25.37■■□□□ 1.65
FAM46A-203ENST00000369756 ARID3CA6NKF2 412 aa25.35■■□□□ 1.65
FAM46A-203ENST00000369756 CLIP1P30622 1438 aa25.32■■□□□ 1.64
FAM46A-203ENST00000369756 ZNF777Q9ULD5 760 aaPredicted RBP25.29■■□□□ 1.64
FAM46A-203ENST00000369756 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
FAM46A-203ENST00000369756 NACADO15069 1562 aa25.25■■□□□ 1.63
FAM46A-203ENST00000369756 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
FAM46A-203ENST00000369756 CANXP27824 592 aaKnown RBP25.22■■□□□ 1.63
FAM46A-203ENST00000369756 FKBP8Q14318 412 aa25.21■■□□□ 1.63
FAM46A-203ENST00000369756 ANP32AP39687 249 aaKnown RBP25.21■■□□□ 1.63
FAM46A-203ENST00000369756 DDX10Q13206 875 aaKnown RBP25.19■■□□□ 1.62
FAM46A-203ENST00000369756 ZBTB47Q9UFB7 747 aaPredicted RBP25.18■■□□□ 1.62
FAM46A-203ENST00000369756 HNRNPUQ00839 825 aaKnown RBP eCLIP25.13■■□□□ 1.61
FAM46A-203ENST00000369756 TNIKQ9UKE5 1360 aa25.09■■□□□ 1.61
FAM46A-203ENST00000369756 NEFMP07197 916 aa25.09■■□□□ 1.61
FAM46A-203ENST00000369756 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
FAM46A-203ENST00000369756 MTUS2Q5JR59 1369 aa25.07■■□□□ 1.6
FAM46A-203ENST00000369756 MIER1Q8N108 512 aa25.04■■□□□ 1.6
FAM46A-203ENST00000369756 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
FAM46A-203ENST00000369756 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
FAM46A-203ENST00000369756 FAM9BQ8IZU0 186 aa25■■□□□ 1.59
FAM46A-203ENST00000369756 CHIC2Q9UKJ5 165 aa25■■□□□ 1.59
FAM46A-203ENST00000369756 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
FAM46A-203ENST00000369756 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
FAM46A-203ENST00000369756 NPM2Q86SE8 214 aaKnown RBP24.91■■□□□ 1.58
FAM46A-203ENST00000369756 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
FAM46A-203ENST00000369756 TMC1Q8TDI8 760 aa24.87■■□□□ 1.57
FAM46A-203ENST00000369756 MRS2Q9HD23 443 aa24.85■■□□□ 1.57
FAM46A-203ENST00000369756 TSPY4P0CV99 314 aa24.83■■□□□ 1.57
FAM46A-203ENST00000369756 TSPY10P0CW01 314 aa24.83■■□□□ 1.57
FAM46A-203ENST00000369756 EIF4G2P78344 907 aaKnown RBP eCLIP24.82■■□□□ 1.56
FAM46A-203ENST00000369756 CCDC136Q96JN2 1154 aa24.79■■□□□ 1.56
FAM46A-203ENST00000369756 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.76■■□□□ 1.55
FAM46A-203ENST00000369756 CHGAP10645 457 aaKnown RBP24.74■■□□□ 1.55
FAM46A-203ENST00000369756 CECR2Q9BXF3 1484 aa24.74■■□□□ 1.55
FAM46A-203ENST00000369756 SLC24A1O60721 1099 aa24.73■■□□□ 1.55
FAM46A-203ENST00000369756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.72■■□□□ 1.55
FAM46A-203ENST00000369756 RRP7BPQ9NSQ0 103 aa24.72■■□□□ 1.55
FAM46A-203ENST00000369756 UPF2Q9HAU5 1272 aaKnown RBP24.72■■□□□ 1.55
FAM46A-203ENST00000369756 WDR43Q15061 677 aaKnown RBP eCLIP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 296.7 ms