RNA–Protein interactions for RNA: ENST00000424952.6

ZDHHC3-205, Transcript of zinc finger DHHC-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZDHHC3, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-205ENST00000424952 NISCHQ9Y2I1 1504 aa41.42■■■■■ 4.22
ZDHHC3-205ENST00000424952 CCDC180Q9P1Z9 1646 aa35.53■■■■□ 3.28
ZDHHC3-205ENST00000424952 ZCCHC6Q5VYS8 1495 aaKnown RBP34.93■■■■□ 3.18
ZDHHC3-205ENST00000424952 SHROOM4Q9ULL8 1493 aa34.64■■■■□ 3.14
ZDHHC3-205ENST00000424952 DCAF8L2P0C7V8 631 aa34.19■■■■□ 3.06
ZDHHC3-205ENST00000424952 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
ZDHHC3-205ENST00000424952 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
ZDHHC3-205ENST00000424952 MYO15BQ96JP2 1530 aa33.36■■■□□ 2.93
ZDHHC3-205ENST00000424952 ABCC9O60706 1549 aa33.14■■■□□ 2.9
ZDHHC3-205ENST00000424952 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
ZDHHC3-205ENST00000424952 NACADO15069 1562 aa32.96■■■□□ 2.87
ZDHHC3-205ENST00000424952 CHIC1Q5VXU3 224 aa32.7■■■□□ 2.82
ZDHHC3-205ENST00000424952 RSF1Q96T23 1441 aaPredicted RBP32.54■■■□□ 2.8
ZDHHC3-205ENST00000424952 RB1CC1Q8TDY2 1594 aa32.48■■■□□ 2.79
ZDHHC3-205ENST00000424952 CECR2Q9BXF3 1484 aa32.26■■■□□ 2.75
ZDHHC3-205ENST00000424952 MROH2BQ7Z745 1585 aa32.12■■■□□ 2.73
ZDHHC3-205ENST00000424952 UNC13AQ9UPW8 1703 aa31.96■■■□□ 2.71
ZDHHC3-205ENST00000424952 WIZO95785 1651 aa31.89■■■□□ 2.7
ZDHHC3-205ENST00000424952 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
ZDHHC3-205ENST00000424952 SMARCA4P51532 1647 aa31.63■■■□□ 2.65
ZDHHC3-205ENST00000424952 BICRAQ9NZM4 1560 aa31.63■■■□□ 2.65
ZDHHC3-205ENST00000424952 LOC105371045A0A1W2PR82 267 aa31.61■■■□□ 2.65
ZDHHC3-205ENST00000424952 TRIM41Q8WV44 630 aa31.56■■■□□ 2.64
ZDHHC3-205ENST00000424952 PABPN1Q86U42 306 aaKnown RBP eCLIP31.55■■■□□ 2.64
ZDHHC3-205ENST00000424952 TOP2AP11388 1531 aaKnown RBP31.46■■■□□ 2.63
ZDHHC3-205ENST00000424952 EIF4G1Q04637 1599 aaKnown RBP31.32■■■□□ 2.6
ZDHHC3-205ENST00000424952 CCDC88BA6NC98 1476 aa31.28■■■□□ 2.6
ZDHHC3-205ENST00000424952 SMARCA2P51531 1590 aa31.25■■■□□ 2.59
ZDHHC3-205ENST00000424952 PEG3Q9GZU2 1588 aa31.15■■■□□ 2.58
ZDHHC3-205ENST00000424952 FAM9AQ8IZU1 332 aaPredicted RBP31.15■■■□□ 2.58
ZDHHC3-205ENST00000424952 PCGF6Q9BYE7 350 aa31■■■□□ 2.55
ZDHHC3-205ENST00000424952 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.55
ZDHHC3-205ENST00000424952 ABCC8Q09428 1581 aa30.93■■■□□ 2.54
ZDHHC3-205ENST00000424952 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
ZDHHC3-205ENST00000424952 EHMT2Q96KQ7 1210 aa30.78■■■□□ 2.52
ZDHHC3-205ENST00000424952 HRCP23327 699 aa30.73■■■□□ 2.51
ZDHHC3-205ENST00000424952 TRIM26Q12899 539 aaPredicted RBP30.66■■■□□ 2.5
ZDHHC3-205ENST00000424952 SOGA1O94964 1423 aa30.57■■■□□ 2.48
ZDHHC3-205ENST00000424952 WRNQ14191 1432 aaPredicted RBP eCLIP30.55■■■□□ 2.48
ZDHHC3-205ENST00000424952 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
ZDHHC3-205ENST00000424952 HMGXB3Q12766 1538 aa30.45■■■□□ 2.46
ZDHHC3-205ENST00000424952 RUSC2Q8N2Y8 1516 aa30.44■■■□□ 2.46
ZDHHC3-205ENST00000424952 EEA1Q15075 1411 aa30.44■■■□□ 2.46
ZDHHC3-205ENST00000424952 SYNJ1O43426 1573 aa30.42■■■□□ 2.46
ZDHHC3-205ENST00000424952 CSRNP3Q8WYN3 585 aa30.38■■■□□ 2.45
ZDHHC3-205ENST00000424952 TNIKQ9UKE5 1360 aa30.25■■■□□ 2.43
ZDHHC3-205ENST00000424952 CEP162Q5TB80 1403 aa30.18■■■□□ 2.42
ZDHHC3-205ENST00000424952 TOP2BQ02880 1626 aa30.15■■■□□ 2.42
ZDHHC3-205ENST00000424952 GOLGA3Q08378 1498 aa30.13■■■□□ 2.41
ZDHHC3-205ENST00000424952 UBTFP17480 764 aaKnown RBP30.1■■■□□ 2.41
ZDHHC3-205ENST00000424952 PPARGC1BQ86YN6 1023 aaKnown RBP30.09■■■□□ 2.41
ZDHHC3-205ENST00000424952 CFTRP13569 1480 aa30.08■■■□□ 2.41
ZDHHC3-205ENST00000424952 BIVM-ERCC5R4GMW8 1640 aa30.06■■■□□ 2.4
ZDHHC3-205ENST00000424952 CEP164Q9UPV0 1460 aa30.04■■■□□ 2.4
ZDHHC3-205ENST00000424952 KIF21BO75037 1637 aa30.03■■■□□ 2.4
ZDHHC3-205ENST00000424952 CUX1P39880 1505 aa29.94■■■□□ 2.38
ZDHHC3-205ENST00000424952 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
ZDHHC3-205ENST00000424952 RAPGEF2Q9Y4G8 1499 aa29.86■■■□□ 2.37
ZDHHC3-205ENST00000424952 CADPSQ9ULU8 1353 aa29.82■■■□□ 2.36
ZDHHC3-205ENST00000424952 PRDM2Q13029 1718 aa29.81■■■□□ 2.36
ZDHHC3-205ENST00000424952 ZEB1P37275 1124 aaPredicted RBP29.76■■■□□ 2.35
ZDHHC3-205ENST00000424952 CLIP1P30622 1438 aa29.74■■■□□ 2.35
ZDHHC3-205ENST00000424952 PRXQ9BXM0 1461 aa29.72■■■□□ 2.35
ZDHHC3-205ENST00000424952 KIF27Q86VH2 1401 aa29.67■■■□□ 2.34
ZDHHC3-205ENST00000424952 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
ZDHHC3-205ENST00000424952 TTBK1Q5TCY1 1321 aaPredicted RBP29.65■■■□□ 2.34
ZDHHC3-205ENST00000424952 VPS8Q8N3P4 1428 aa29.58■■■□□ 2.33
ZDHHC3-205ENST00000424952 RANGAP1P46060 587 aaPredicted RBP29.5■■■□□ 2.31
ZDHHC3-205ENST00000424952 FANCD2Q9BXW9 1451 aa29.5■■■□□ 2.31
ZDHHC3-205ENST00000424952 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
ZDHHC3-205ENST00000424952 CUX2O14529 1486 aa29.45■■■□□ 2.31
ZDHHC3-205ENST00000424952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.45■■■□□ 2.3
ZDHHC3-205ENST00000424952 IGF1RP08069 1367 aa29.43■■■□□ 2.3
ZDHHC3-205ENST00000424952 NESP48681 1621 aa29.4■■■□□ 2.3
ZDHHC3-205ENST00000424952 ARAP1Q96P48 1450 aa29.36■■■□□ 2.29
ZDHHC3-205ENST00000424952 CCER1Q8TC90 406 aaPredicted RBP29.34■■■□□ 2.29
ZDHHC3-205ENST00000424952 DNMBPQ6XZF7 1577 aa29.31■■■□□ 2.28
ZDHHC3-205ENST00000424952 APLP2Q06481 763 aa29.31■■■□□ 2.28
ZDHHC3-205ENST00000424952 TOPBP1Q92547 1522 aa29.27■■■□□ 2.28
ZDHHC3-205ENST00000424952 LAMC3Q9Y6N6 1575 aa29.26■■■□□ 2.27
ZDHHC3-205ENST00000424952 CARMIL1Q5VZK9 1371 aa29.25■■■□□ 2.27
ZDHHC3-205ENST00000424952 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
ZDHHC3-205ENST00000424952 POLA1P09884 1462 aaPredicted RBP29.21■■■□□ 2.27
ZDHHC3-205ENST00000424952 RAD54L2Q9Y4B4 1467 aa29.21■■■□□ 2.27
ZDHHC3-205ENST00000424952 ARHGAP35Q9NRY4 1499 aa29.2■■■□□ 2.27
ZDHHC3-205ENST00000424952 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
ZDHHC3-205ENST00000424952 URB2Q14146 1524 aaKnown RBP29.11■■■□□ 2.25
ZDHHC3-205ENST00000424952 KANK4Q5T7N3 995 aaPredicted RBP29.08■■■□□ 2.25
ZDHHC3-205ENST00000424952 HNRNPUL2Q1KMD3 747 aaKnown RBP29.07■■■□□ 2.24
ZDHHC3-205ENST00000424952 PDS5BQ9NTI5 1447 aa29.05■■■□□ 2.24
ZDHHC3-205ENST00000424952 WDR97A6NE52 1622 aa28.95■■■□□ 2.23
ZDHHC3-205ENST00000424952 KIF21AQ7Z4S6 1674 aa28.92■■■□□ 2.22
ZDHHC3-205ENST00000424952 CUL7Q14999 1698 aa28.92■■■□□ 2.22
ZDHHC3-205ENST00000424952 TDRD9Q8NDG6 1382 aaKnown RBP28.87■■■□□ 2.21
ZDHHC3-205ENST00000424952 ABCA5Q8WWZ7 1642 aa28.85■■■□□ 2.21
ZDHHC3-205ENST00000424952 RRBP1Q9P2E9 1410 aaKnown RBP28.84■■■□□ 2.21
ZDHHC3-205ENST00000424952 MAP3K1Q13233 1512 aa28.83■■■□□ 2.21
ZDHHC3-205ENST00000424952 GAPVD1Q14C86 1478 aa28.8■■■□□ 2.2
ZDHHC3-205ENST00000424952 TIAM1Q13009 1591 aa28.78■■■□□ 2.2
ZDHHC3-205ENST00000424952 P3H3Q8IVL6 736 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms