Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HS3ST3A1Q9Y663 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HS3ST3A1Q9Y663 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HS3ST3A1Q9Y663 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.83■■□□□ 1.73
HS3ST3A1Q9Y663 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.83■■□□□ 1.73
HS3ST3A1Q9Y663 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.83■■□□□ 1.73
HS3ST3A1Q9Y663 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
HS3ST3A1Q9Y663 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
HS3ST3A1Q9Y663 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
HS3ST3A1Q9Y663 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.81■■□□□ 1.72
HS3ST3A1Q9Y663 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
HS3ST3A1Q9Y663 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HS3ST3A1Q9Y663 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.8■■□□□ 1.72
HS3ST3A1Q9Y663 AL135925.1-201ENST00000605920 1701 ntBASIC25.8■■□□□ 1.72
HS3ST3A1Q9Y663 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
HS3ST3A1Q9Y663 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
HS3ST3A1Q9Y663 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
HS3ST3A1Q9Y663 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
HS3ST3A1Q9Y663 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
HS3ST3A1Q9Y663 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.77■■□□□ 1.72
HS3ST3A1Q9Y663 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
HS3ST3A1Q9Y663 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.72
HS3ST3A1Q9Y663 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.76■■□□□ 1.71
HS3ST3A1Q9Y663 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
HS3ST3A1Q9Y663 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HS3ST3A1Q9Y663 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.75■■□□□ 1.71
HS3ST3A1Q9Y663 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
HS3ST3A1Q9Y663 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
HS3ST3A1Q9Y663 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.72■■□□□ 1.71
HS3ST3A1Q9Y663 AC127502.1-201ENST00000399971 1502 ntBASIC25.72■■□□□ 1.71
HS3ST3A1Q9Y663 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
HS3ST3A1Q9Y663 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HS3ST3A1Q9Y663 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.71■■□□□ 1.71
HS3ST3A1Q9Y663 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
HS3ST3A1Q9Y663 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
HS3ST3A1Q9Y663 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
HS3ST3A1Q9Y663 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.69■■□□□ 1.7
HS3ST3A1Q9Y663 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.69■■□□□ 1.7
HS3ST3A1Q9Y663 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.68■■□□□ 1.7
HS3ST3A1Q9Y663 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
HS3ST3A1Q9Y663 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
HS3ST3A1Q9Y663 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HS3ST3A1Q9Y663 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
HS3ST3A1Q9Y663 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HS3ST3A1Q9Y663 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
HS3ST3A1Q9Y663 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
HS3ST3A1Q9Y663 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
HS3ST3A1Q9Y663 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
HS3ST3A1Q9Y663 AC135983.2-203ENST00000454486 1613 ntBASIC25.63■■□□□ 1.69
HS3ST3A1Q9Y663 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
HS3ST3A1Q9Y663 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.62■■□□□ 1.69
HS3ST3A1Q9Y663 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
HS3ST3A1Q9Y663 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HS3ST3A1Q9Y663 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
HS3ST3A1Q9Y663 HSD17B1P1-201ENST00000590052 955 ntBASIC25.61■■□□□ 1.69
HS3ST3A1Q9Y663 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.6■■□□□ 1.69
HS3ST3A1Q9Y663 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
HS3ST3A1Q9Y663 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HS3ST3A1Q9Y663 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.59■■□□□ 1.69
HS3ST3A1Q9Y663 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
HS3ST3A1Q9Y663 WHAMMP2-203ENST00000563942 1603 ntBASIC25.58■■□□□ 1.69
HS3ST3A1Q9Y663 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.57■■□□□ 1.68
HS3ST3A1Q9Y663 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HS3ST3A1Q9Y663 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.56■■□□□ 1.68
HS3ST3A1Q9Y663 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
HS3ST3A1Q9Y663 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.55■■□□□ 1.68
HS3ST3A1Q9Y663 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HS3ST3A1Q9Y663 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HS3ST3A1Q9Y663 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.55■■□□□ 1.68
HS3ST3A1Q9Y663 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
HS3ST3A1Q9Y663 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
HS3ST3A1Q9Y663 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
HS3ST3A1Q9Y663 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.54■■□□□ 1.68
HS3ST3A1Q9Y663 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HS3ST3A1Q9Y663 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HS3ST3A1Q9Y663 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.53■■□□□ 1.68
HS3ST3A1Q9Y663 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
HS3ST3A1Q9Y663 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.52■■□□□ 1.68
HS3ST3A1Q9Y663 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HS3ST3A1Q9Y663 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
HS3ST3A1Q9Y663 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HS3ST3A1Q9Y663 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
HS3ST3A1Q9Y663 AC008813.1-201ENST00000536597 885 ntBASIC25.51■■□□□ 1.67
HS3ST3A1Q9Y663 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
HS3ST3A1Q9Y663 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
HS3ST3A1Q9Y663 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HS3ST3A1Q9Y663 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms