Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHB7Q9Y5E2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHB7Q9Y5E2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHB7Q9Y5E2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.36■■■□□ 2.13
PCDHB7Q9Y5E2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.36■■■□□ 2.13
PCDHB7Q9Y5E2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHB7Q9Y5E2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHB7Q9Y5E2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.35■■■□□ 2.13
PCDHB7Q9Y5E2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHB7Q9Y5E2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.34■■■□□ 2.13
PCDHB7Q9Y5E2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHB7Q9Y5E2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.33■■■□□ 2.13
PCDHB7Q9Y5E2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.33■■■□□ 2.13
PCDHB7Q9Y5E2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB7Q9Y5E2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB7Q9Y5E2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB7Q9Y5E2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB7Q9Y5E2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB7Q9Y5E2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB7Q9Y5E2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB7Q9Y5E2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB7Q9Y5E2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDHB7Q9Y5E2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHB7Q9Y5E2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHB7Q9Y5E2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.29■■■□□ 2.12
PCDHB7Q9Y5E2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHB7Q9Y5E2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.29■■■□□ 2.12
PCDHB7Q9Y5E2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHB7Q9Y5E2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHB7Q9Y5E2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHB7Q9Y5E2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHB7Q9Y5E2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
PCDHB7Q9Y5E2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.26■■■□□ 2.11
PCDHB7Q9Y5E2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHB7Q9Y5E2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHB7Q9Y5E2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
PCDHB7Q9Y5E2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
PCDHB7Q9Y5E2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.23■■■□□ 2.11
PCDHB7Q9Y5E2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.23■■■□□ 2.11
PCDHB7Q9Y5E2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHB7Q9Y5E2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHB7Q9Y5E2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
PCDHB7Q9Y5E2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB7Q9Y5E2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB7Q9Y5E2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.19■■■□□ 2.1
PCDHB7Q9Y5E2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB7Q9Y5E2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB7Q9Y5E2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHB7Q9Y5E2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
PCDHB7Q9Y5E2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.17■■■□□ 2.1
PCDHB7Q9Y5E2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHB7Q9Y5E2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PCDHB7Q9Y5E2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB7Q9Y5E2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB7Q9Y5E2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB7Q9Y5E2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB7Q9Y5E2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHB7Q9Y5E2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHB7Q9Y5E2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
PCDHB7Q9Y5E2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHB7Q9Y5E2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHB7Q9Y5E2 GPX1-201ENST00000419349 1106 ntBASIC28.14■■■□□ 2.1
PCDHB7Q9Y5E2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.14■■■□□ 2.1
PCDHB7Q9Y5E2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHB7Q9Y5E2 AC127502.1-201ENST00000399971 1502 ntBASIC28.13■■■□□ 2.09
PCDHB7Q9Y5E2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHB7Q9Y5E2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
PCDHB7Q9Y5E2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHB7Q9Y5E2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHB7Q9Y5E2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.11■■■□□ 2.09
PCDHB7Q9Y5E2 RARRES2P2-201ENST00000394842 485 ntBASIC28.11■■■□□ 2.09
PCDHB7Q9Y5E2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.11■■■□□ 2.09
PCDHB7Q9Y5E2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB7Q9Y5E2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB7Q9Y5E2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.09■■■□□ 2.09
PCDHB7Q9Y5E2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB7Q9Y5E2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.08■■■□□ 2.09
PCDHB7Q9Y5E2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
PCDHB7Q9Y5E2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.07■■■□□ 2.08
PCDHB7Q9Y5E2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
PCDHB7Q9Y5E2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
PCDHB7Q9Y5E2 AC008813.1-201ENST00000536597 885 ntBASIC28.06■■■□□ 2.08
PCDHB7Q9Y5E2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.06■■■□□ 2.08
PCDHB7Q9Y5E2 AC135983.2-203ENST00000454486 1613 ntBASIC28.05■■■□□ 2.08
PCDHB7Q9Y5E2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.05■■■□□ 2.08
PCDHB7Q9Y5E2 WHAMMP2-203ENST00000563942 1603 ntBASIC28.04■■■□□ 2.08
PCDHB7Q9Y5E2 RNF126P1-201ENST00000567452 1320 ntBASIC28.04■■■□□ 2.08
PCDHB7Q9Y5E2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHB7Q9Y5E2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHB7Q9Y5E2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHB7Q9Y5E2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
PCDHB7Q9Y5E2 AL135925.1-201ENST00000605920 1701 ntBASIC28.03■■■□□ 2.08
PCDHB7Q9Y5E2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
PCDHB7Q9Y5E2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.02■■■□□ 2.08
PCDHB7Q9Y5E2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.01■■■□□ 2.08
PCDHB7Q9Y5E2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHB7Q9Y5E2 ABHD17AP5-201ENST00000580133 923 ntBASIC28.01■■■□□ 2.07
PCDHB7Q9Y5E2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHB7Q9Y5E2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
PCDHB7Q9Y5E2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms