Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.14■■■□□ 2.25
BLOC1S4Q9NUP1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
BLOC1S4Q9NUP1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
BLOC1S4Q9NUP1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
BLOC1S4Q9NUP1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
BLOC1S4Q9NUP1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
BLOC1S4Q9NUP1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
BLOC1S4Q9NUP1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
BLOC1S4Q9NUP1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
BLOC1S4Q9NUP1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.09■■■□□ 2.25
BLOC1S4Q9NUP1 AC108673.1-201ENST00000510422 1159 ntBASIC29.08■■■□□ 2.25
BLOC1S4Q9NUP1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.08■■■□□ 2.25
BLOC1S4Q9NUP1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
BLOC1S4Q9NUP1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
BLOC1S4Q9NUP1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
BLOC1S4Q9NUP1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
BLOC1S4Q9NUP1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
BLOC1S4Q9NUP1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.06■■■□□ 2.24
BLOC1S4Q9NUP1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.06■■■□□ 2.24
BLOC1S4Q9NUP1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
BLOC1S4Q9NUP1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
BLOC1S4Q9NUP1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.04■■■□□ 2.24
BLOC1S4Q9NUP1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
BLOC1S4Q9NUP1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
BLOC1S4Q9NUP1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
BLOC1S4Q9NUP1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
BLOC1S4Q9NUP1 RPS2P35-201ENST00000443417 897 ntBASIC29.02■■■□□ 2.24
BLOC1S4Q9NUP1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
BLOC1S4Q9NUP1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
BLOC1S4Q9NUP1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
BLOC1S4Q9NUP1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
BLOC1S4Q9NUP1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
BLOC1S4Q9NUP1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29■■■□□ 2.23
BLOC1S4Q9NUP1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.98■■■□□ 2.23
BLOC1S4Q9NUP1 AC044849.2-201ENST00000606596 710 ntBASIC28.98■■■□□ 2.23
BLOC1S4Q9NUP1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
BLOC1S4Q9NUP1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
BLOC1S4Q9NUP1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.97■■■□□ 2.23
BLOC1S4Q9NUP1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
BLOC1S4Q9NUP1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
BLOC1S4Q9NUP1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.96■■■□□ 2.23
BLOC1S4Q9NUP1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
BLOC1S4Q9NUP1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
BLOC1S4Q9NUP1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
BLOC1S4Q9NUP1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
BLOC1S4Q9NUP1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.93■■■□□ 2.22
BLOC1S4Q9NUP1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
BLOC1S4Q9NUP1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
BLOC1S4Q9NUP1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.92■■■□□ 2.22
BLOC1S4Q9NUP1 AP004833.2-201ENST00000532228 1454 ntBASIC28.91■■■□□ 2.22
BLOC1S4Q9NUP1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.91■■■□□ 2.22
BLOC1S4Q9NUP1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.9■■■□□ 2.22
BLOC1S4Q9NUP1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
BLOC1S4Q9NUP1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
BLOC1S4Q9NUP1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
BLOC1S4Q9NUP1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.89■■■□□ 2.22
BLOC1S4Q9NUP1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
BLOC1S4Q9NUP1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
BLOC1S4Q9NUP1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.88■■■□□ 2.21
BLOC1S4Q9NUP1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
BLOC1S4Q9NUP1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
BLOC1S4Q9NUP1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.87■■■□□ 2.21
BLOC1S4Q9NUP1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
BLOC1S4Q9NUP1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
BLOC1S4Q9NUP1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.86■■■□□ 2.21
BLOC1S4Q9NUP1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
BLOC1S4Q9NUP1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
BLOC1S4Q9NUP1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.86■■■□□ 2.21
BLOC1S4Q9NUP1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.86■■■□□ 2.21
BLOC1S4Q9NUP1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
BLOC1S4Q9NUP1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
BLOC1S4Q9NUP1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
BLOC1S4Q9NUP1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.85■■■□□ 2.21
BLOC1S4Q9NUP1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
BLOC1S4Q9NUP1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
BLOC1S4Q9NUP1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
BLOC1S4Q9NUP1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.84■■■□□ 2.21
BLOC1S4Q9NUP1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
BLOC1S4Q9NUP1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
BLOC1S4Q9NUP1 AC135983.2-203ENST00000454486 1613 ntBASIC28.82■■■□□ 2.2
BLOC1S4Q9NUP1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
BLOC1S4Q9NUP1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
BLOC1S4Q9NUP1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
BLOC1S4Q9NUP1 LINC00273-201ENST00000539813 1452 ntBASIC28.8■■■□□ 2.2
BLOC1S4Q9NUP1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
BLOC1S4Q9NUP1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
BLOC1S4Q9NUP1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
BLOC1S4Q9NUP1 DRD5P2-201ENST00000421395 2012 ntBASIC28.79■■■□□ 2.2
BLOC1S4Q9NUP1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.79■■■□□ 2.2
BLOC1S4Q9NUP1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
BLOC1S4Q9NUP1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
BLOC1S4Q9NUP1 WHAMMP2-203ENST00000563942 1603 ntBASIC28.77■■■□□ 2.2
BLOC1S4Q9NUP1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
BLOC1S4Q9NUP1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
BLOC1S4Q9NUP1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.76■■■□□ 2.19
BLOC1S4Q9NUP1 AC021231.2-201ENST00000594613 730 ntBASIC28.76■■■□□ 2.19
BLOC1S4Q9NUP1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
BLOC1S4Q9NUP1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.74■■■□□ 2.19
BLOC1S4Q9NUP1 AC100797.4-201ENST00000631653 1827 ntBASIC28.74■■■□□ 2.19
BLOC1S4Q9NUP1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms