Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.55■■□□□ 1.52
MKKSQ9NPJ1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
MKKSQ9NPJ1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.54■■□□□ 1.52
MKKSQ9NPJ1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MKKSQ9NPJ1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MKKSQ9NPJ1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.53■■□□□ 1.52
MKKSQ9NPJ1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
MKKSQ9NPJ1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.53■■□□□ 1.52
MKKSQ9NPJ1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MKKSQ9NPJ1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.52■■□□□ 1.52
MKKSQ9NPJ1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MKKSQ9NPJ1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
MKKSQ9NPJ1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
MKKSQ9NPJ1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
MKKSQ9NPJ1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKKSQ9NPJ1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKKSQ9NPJ1 LINC00273-201ENST00000539813 1452 ntBASIC24.5■■□□□ 1.51
MKKSQ9NPJ1 AC127502.1-201ENST00000399971 1502 ntBASIC24.5■■□□□ 1.51
MKKSQ9NPJ1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKKSQ9NPJ1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
MKKSQ9NPJ1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
MKKSQ9NPJ1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.49■■□□□ 1.51
MKKSQ9NPJ1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
MKKSQ9NPJ1 DUX4L11-201ENST00000611504 1267 ntBASIC24.48■■□□□ 1.51
MKKSQ9NPJ1 DUX4L12-201ENST00000614593 1267 ntBASIC24.48■■□□□ 1.51
MKKSQ9NPJ1 DUX4L14-201ENST00000621227 1267 ntBASIC24.48■■□□□ 1.51
MKKSQ9NPJ1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 ST7-AS1-201ENST00000456775 1889 ntBASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
MKKSQ9NPJ1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.46■■□□□ 1.51
MKKSQ9NPJ1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.46■■□□□ 1.51
MKKSQ9NPJ1 ABCB10P1-201ENST00000614297 2181 ntBASIC24.46■■□□□ 1.51
MKKSQ9NPJ1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
MKKSQ9NPJ1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.45■■□□□ 1.5
MKKSQ9NPJ1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.44■■□□□ 1.5
MKKSQ9NPJ1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.44■■□□□ 1.5
MKKSQ9NPJ1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.44■■□□□ 1.5
MKKSQ9NPJ1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.44■■□□□ 1.5
MKKSQ9NPJ1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.44■■□□□ 1.5
MKKSQ9NPJ1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.43■■□□□ 1.5
MKKSQ9NPJ1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
MKKSQ9NPJ1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.43■■□□□ 1.5
MKKSQ9NPJ1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
MKKSQ9NPJ1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
MKKSQ9NPJ1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.42■■□□□ 1.5
MKKSQ9NPJ1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MKKSQ9NPJ1 HLA-V-202ENST00000446817 847 ntBASIC24.42■■□□□ 1.5
MKKSQ9NPJ1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
MKKSQ9NPJ1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.4■■□□□ 1.5
MKKSQ9NPJ1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
MKKSQ9NPJ1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
MKKSQ9NPJ1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.39■■□□□ 1.49
MKKSQ9NPJ1 MIR3648-2-201ENST00000581792 180 ntBASIC24.39■■□□□ 1.49
MKKSQ9NPJ1 MIR3648-1-201ENST00000615959 180 ntBASIC24.39■■□□□ 1.49
MKKSQ9NPJ1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
MKKSQ9NPJ1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
MKKSQ9NPJ1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 DUX4L13-201ENST00000554103 1267 ntBASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 DUX4L15-201ENST00000611059 1267 ntBASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 DUX4L23-201ENST00000615195 1269 ntBASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 DUX4L24-201ENST00000617576 1269 ntBASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 DUX4L22-201ENST00000618238 1269 ntBASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 DUX4L20-201ENST00000619712 1269 ntBASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 DUX4L21-201ENST00000622058 1269 ntBASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 DUX4L10-201ENST00000622460 1267 ntBASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 DUX4L25-201ENST00000624915 1269 ntBASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.38■■□□□ 1.49
MKKSQ9NPJ1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MKKSQ9NPJ1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MKKSQ9NPJ1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MKKSQ9NPJ1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
MKKSQ9NPJ1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
MKKSQ9NPJ1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MKKSQ9NPJ1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
MKKSQ9NPJ1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MKKSQ9NPJ1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MKKSQ9NPJ1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MKKSQ9NPJ1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MKKSQ9NPJ1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
MKKSQ9NPJ1 CR559946.2-201ENST00000623684 991 ntBASIC24.35■■□□□ 1.49
MKKSQ9NPJ1 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.35■■□□□ 1.49
MKKSQ9NPJ1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
MKKSQ9NPJ1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.34■■□□□ 1.49
MKKSQ9NPJ1 AC016575.1-201ENST00000607026 382 ntBASIC24.34■■□□□ 1.49
MKKSQ9NPJ1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MKKSQ9NPJ1 AC135983.2-203ENST00000454486 1613 ntBASIC24.33■■□□□ 1.49
MKKSQ9NPJ1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MKKSQ9NPJ1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MKKSQ9NPJ1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
MKKSQ9NPJ1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
MKKSQ9NPJ1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms