Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 DUX4L20-201ENST00000619712 1269 ntBASIC39.89■■■■□ 3.98
PTPN23Q9H3S7 DUX4L21-201ENST00000622058 1269 ntBASIC39.89■■■■□ 3.98
PTPN23Q9H3S7 DUX4L10-201ENST00000622460 1267 ntBASIC39.89■■■■□ 3.98
PTPN23Q9H3S7 DUX4L25-201ENST00000624915 1269 ntBASIC39.89■■■■□ 3.98
PTPN23Q9H3S7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC39.88■■■■□ 3.97
PTPN23Q9H3S7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC39.88■■■■□ 3.97
PTPN23Q9H3S7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
PTPN23Q9H3S7 AL135925.1-201ENST00000605920 1701 ntBASIC39.87■■■■□ 3.97
PTPN23Q9H3S7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC39.86■■■■□ 3.97
PTPN23Q9H3S7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC39.86■■■■□ 3.97
PTPN23Q9H3S7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC39.86■■■■□ 3.97
PTPN23Q9H3S7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
PTPN23Q9H3S7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC39.85■■■■□ 3.97
PTPN23Q9H3S7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC39.85■■■■□ 3.97
PTPN23Q9H3S7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC39.84■■■■□ 3.97
PTPN23Q9H3S7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC39.82■■■■□ 3.96
PTPN23Q9H3S7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
PTPN23Q9H3S7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
PTPN23Q9H3S7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
PTPN23Q9H3S7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC39.8■■■■□ 3.96
PTPN23Q9H3S7 CHML-204ENST00000638121 920 ntTSL 2 BASIC39.8■■■■□ 3.96
PTPN23Q9H3S7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
PTPN23Q9H3S7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC39.76■■■■□ 3.95
PTPN23Q9H3S7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC39.76■■■■□ 3.95
PTPN23Q9H3S7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC39.74■■■■□ 3.95
PTPN23Q9H3S7 AC127502.1-201ENST00000399971 1502 ntBASIC39.74■■■■□ 3.95
PTPN23Q9H3S7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC39.74■■■■□ 3.95
PTPN23Q9H3S7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC39.74■■■■□ 3.95
PTPN23Q9H3S7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
PTPN23Q9H3S7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
PTPN23Q9H3S7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
PTPN23Q9H3S7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
PTPN23Q9H3S7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
PTPN23Q9H3S7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC39.71■■■■□ 3.95
PTPN23Q9H3S7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC39.71■■■■□ 3.95
PTPN23Q9H3S7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC39.71■■■■□ 3.95
PTPN23Q9H3S7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC39.69■■■■□ 3.94
PTPN23Q9H3S7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC39.68■■■■□ 3.94
PTPN23Q9H3S7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC39.67■■■■□ 3.94
PTPN23Q9H3S7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC39.66■■■■□ 3.94
PTPN23Q9H3S7 AC135983.2-203ENST00000454486 1613 ntBASIC39.66■■■■□ 3.94
PTPN23Q9H3S7 HES6-205ENST00000409356 528 ntTSL 2 BASIC39.65■■■■□ 3.94
PTPN23Q9H3S7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC39.65■■■■□ 3.94
PTPN23Q9H3S7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC39.65■■■■□ 3.94
PTPN23Q9H3S7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC39.64■■■■□ 3.94
PTPN23Q9H3S7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC39.64■■■■□ 3.94
PTPN23Q9H3S7 WHAMMP2-203ENST00000563942 1603 ntBASIC39.64■■■■□ 3.94
PTPN23Q9H3S7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC39.64■■■■□ 3.94
PTPN23Q9H3S7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
PTPN23Q9H3S7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC39.59■■■■□ 3.93
PTPN23Q9H3S7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC39.58■■■■□ 3.93
PTPN23Q9H3S7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC39.58■■■■□ 3.93
PTPN23Q9H3S7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC39.57■■■■□ 3.93
PTPN23Q9H3S7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
PTPN23Q9H3S7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC39.57■■■■□ 3.92
PTPN23Q9H3S7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC39.56■■■■□ 3.92
PTPN23Q9H3S7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC39.56■■■■□ 3.92
PTPN23Q9H3S7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC39.55■■■■□ 3.92
PTPN23Q9H3S7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC39.54■■■■□ 3.92
PTPN23Q9H3S7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
PTPN23Q9H3S7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC39.54■■■■□ 3.92
PTPN23Q9H3S7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC39.54■■■■□ 3.92
PTPN23Q9H3S7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC39.53■■■■□ 3.92
PTPN23Q9H3S7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC39.52■■■■□ 3.92
PTPN23Q9H3S7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
PTPN23Q9H3S7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
PTPN23Q9H3S7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC39.51■■■■□ 3.92
PTPN23Q9H3S7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC39.51■■■■□ 3.92
PTPN23Q9H3S7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC39.51■■■■□ 3.91
PTPN23Q9H3S7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC39.51■■■■□ 3.91
PTPN23Q9H3S7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC39.5■■■■□ 3.91
PTPN23Q9H3S7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC39.5■■■■□ 3.91
PTPN23Q9H3S7 HSD17B1P1-201ENST00000590052 955 ntBASIC39.49■■■■□ 3.91
PTPN23Q9H3S7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
PTPN23Q9H3S7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
PTPN23Q9H3S7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
PTPN23Q9H3S7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC39.45■■■■□ 3.91
PTPN23Q9H3S7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
PTPN23Q9H3S7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
PTPN23Q9H3S7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC39.45■■■■□ 3.91
PTPN23Q9H3S7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC39.44■■■■□ 3.9
PTPN23Q9H3S7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC39.44■■■■□ 3.9
PTPN23Q9H3S7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
PTPN23Q9H3S7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
PTPN23Q9H3S7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC39.41■■■■□ 3.9
PTPN23Q9H3S7 ST7-AS1-201ENST00000456775 1889 ntBASIC39.41■■■■□ 3.9
PTPN23Q9H3S7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC39.41■■■■□ 3.9
PTPN23Q9H3S7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC39.4■■■■□ 3.9
PTPN23Q9H3S7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC39.4■■■■□ 3.9
PTPN23Q9H3S7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC39.39■■■■□ 3.9
PTPN23Q9H3S7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC39.39■■■■□ 3.9
PTPN23Q9H3S7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC39.38■■■■□ 3.9
PTPN23Q9H3S7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.9
PTPN23Q9H3S7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC39.38■■■■□ 3.9
PTPN23Q9H3S7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
PTPN23Q9H3S7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
PTPN23Q9H3S7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
PTPN23Q9H3S7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC39.37■■■■□ 3.89
PTPN23Q9H3S7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC39.37■■■■□ 3.89
PTPN23Q9H3S7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms