Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM2Q9C040 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM2Q9C040 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM2Q9C040 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM2Q9C040 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TRIM2Q9C040 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM2Q9C040 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 AP006261.1-201ENST00000584783 668 ntBASIC23.73■■□□□ 1.39
TRIM2Q9C040 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRIM2Q9C040 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM2Q9C040 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.72■■□□□ 1.39
TRIM2Q9C040 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.72■■□□□ 1.39
TRIM2Q9C040 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.71■■□□□ 1.39
TRIM2Q9C040 AL162393.1-201ENST00000437852 946 ntBASIC23.71■■□□□ 1.39
TRIM2Q9C040 AP004833.2-201ENST00000532228 1454 ntBASIC23.7■■□□□ 1.38
TRIM2Q9C040 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM2Q9C040 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM2Q9C040 AC142086.6-201ENST00000621154 1765 ntBASIC23.7■■□□□ 1.38
TRIM2Q9C040 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM2Q9C040 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM2Q9C040 AC005559.1-201ENST00000589661 871 ntBASIC23.69■■□□□ 1.38
TRIM2Q9C040 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM2Q9C040 AC127502.1-201ENST00000399971 1502 ntBASIC23.69■■□□□ 1.38
TRIM2Q9C040 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIM2Q9C040 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM2Q9C040 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM2Q9C040 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM2Q9C040 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
TRIM2Q9C040 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIM2Q9C040 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM2Q9C040 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM2Q9C040 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.65■■□□□ 1.38
TRIM2Q9C040 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM2Q9C040 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.64■■□□□ 1.38
TRIM2Q9C040 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.64■■□□□ 1.38
TRIM2Q9C040 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM2Q9C040 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM2Q9C040 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM2Q9C040 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM2Q9C040 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM2Q9C040 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM2Q9C040 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM2Q9C040 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM2Q9C040 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM2Q9C040 DRD5P2-201ENST00000421395 2012 ntBASIC23.62■■□□□ 1.37
TRIM2Q9C040 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM2Q9C040 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM2Q9C040 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM2Q9C040 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TRIM2Q9C040 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TRIM2Q9C040 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM2Q9C040 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM2Q9C040 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.37
TRIM2Q9C040 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
TRIM2Q9C040 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM2Q9C040 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM2Q9C040 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM2Q9C040 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM2Q9C040 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM2Q9C040 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.57■■□□□ 1.36
TRIM2Q9C040 MIR3665-201ENST00000578708 105 ntBASIC23.57■■□□□ 1.36
TRIM2Q9C040 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM2Q9C040 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.56■■□□□ 1.36
TRIM2Q9C040 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM2Q9C040 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM2Q9C040 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM2Q9C040 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM2Q9C040 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM2Q9C040 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.56■■□□□ 1.36
TRIM2Q9C040 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM2Q9C040 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM2Q9C040 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM2Q9C040 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TRIM2Q9C040 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.54■■□□□ 1.36
TRIM2Q9C040 AC108673.1-201ENST00000510422 1159 ntBASIC23.54■■□□□ 1.36
TRIM2Q9C040 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM2Q9C040 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM2Q9C040 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM2Q9C040 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.53■■□□□ 1.36
TRIM2Q9C040 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM2Q9C040 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TRIM2Q9C040 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM2Q9C040 DUX4L28-201ENST00000623687 678 ntBASIC23.52■■□□□ 1.36
TRIM2Q9C040 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM2Q9C040 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM2Q9C040 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms