Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN1Q96RW7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN1Q96RW7 WASH5P-204ENST00000632292 975 ntBASIC8.34□□□□□ -1.07
HMCN1Q96RW7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC8.34□□□□□ -1.07
HMCN1Q96RW7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC8.34□□□□□ -1.07
HMCN1Q96RW7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC8.34□□□□□ -1.07
HMCN1Q96RW7 HES6-204ENST00000409182 863 ntTSL 2 BASIC8.33□□□□□ -1.08
HMCN1Q96RW7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
HMCN1Q96RW7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC8.33□□□□□ -1.08
HMCN1Q96RW7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HMCN1Q96RW7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC8.33□□□□□ -1.08
HMCN1Q96RW7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMCN1Q96RW7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMCN1Q96RW7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC8.32□□□□□ -1.08
HMCN1Q96RW7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMCN1Q96RW7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMCN1Q96RW7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC8.32□□□□□ -1.08
HMCN1Q96RW7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMCN1Q96RW7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
HMCN1Q96RW7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HMCN1Q96RW7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC8.31□□□□□ -1.08
HMCN1Q96RW7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HMCN1Q96RW7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
HMCN1Q96RW7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HMCN1Q96RW7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC8.31□□□□□ -1.08
HMCN1Q96RW7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HMCN1Q96RW7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HMCN1Q96RW7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC8.31□□□□□ -1.08
HMCN1Q96RW7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 RALB-208ENST00000631312 311 ntTSL 5 BASIC8.3□□□□□ -1.08
HMCN1Q96RW7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 RP9P-202ENST00000450133 1212 ntBASIC8.29□□□□□ -1.08
HMCN1Q96RW7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 AC009299.2-201ENST00000482477 511 ntBASIC8.29□□□□□ -1.08
HMCN1Q96RW7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
HMCN1Q96RW7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC8.28□□□□□ -1.08
HMCN1Q96RW7 GUSBP5-201ENST00000418136 578 ntBASIC8.27□□□□□ -1.09
HMCN1Q96RW7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC8.27□□□□□ -1.09
HMCN1Q96RW7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HMCN1Q96RW7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HMCN1Q96RW7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC8.26□□□□□ -1.09
HMCN1Q96RW7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC8.26□□□□□ -1.09
HMCN1Q96RW7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HMCN1Q96RW7 MIR638-201ENST00000385237 100 ntBASIC8.26□□□□□ -1.09
HMCN1Q96RW7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HMCN1Q96RW7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HMCN1Q96RW7 KRT8P33-201ENST00000508125 1423 ntBASIC8.26□□□□□ -1.09
HMCN1Q96RW7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC8.25□□□□□ -1.09
HMCN1Q96RW7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC8.25□□□□□ -1.09
HMCN1Q96RW7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC8.25□□□□□ -1.09
HMCN1Q96RW7 AC008406.3-201ENST00000620001 1374 ntBASIC8.25□□□□□ -1.09
HMCN1Q96RW7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMCN1Q96RW7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC8.25□□□□□ -1.09
HMCN1Q96RW7 RARRES2P6-201ENST00000567333 442 ntBASIC8.25□□□□□ -1.09
HMCN1Q96RW7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC8.24□□□□□ -1.09
HMCN1Q96RW7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
HMCN1Q96RW7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMCN1Q96RW7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC8.24□□□□□ -1.09
HMCN1Q96RW7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC8.24□□□□□ -1.09
HMCN1Q96RW7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC8.24□□□□□ -1.09
HMCN1Q96RW7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
HMCN1Q96RW7 AC060814.1-201ENST00000554326 538 ntBASIC8.24□□□□□ -1.09
HMCN1Q96RW7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMCN1Q96RW7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HMCN1Q96RW7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC8.23□□□□□ -1.09
HMCN1Q96RW7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC8.23□□□□□ -1.09
HMCN1Q96RW7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
HMCN1Q96RW7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HMCN1Q96RW7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HMCN1Q96RW7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms