Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ACAP3Q96P50 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ACAP3Q96P50 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ACAP3Q96P50 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ACAP3Q96P50 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ACAP3Q96P50 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
ACAP3Q96P50 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
ACAP3Q96P50 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ACAP3Q96P50 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ACAP3Q96P50 LINC00273-201ENST00000539813 1452 ntBASIC28.24■■■□□ 2.11
ACAP3Q96P50 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.24■■■□□ 2.11
ACAP3Q96P50 DUX4L11-201ENST00000611504 1267 ntBASIC28.23■■■□□ 2.11
ACAP3Q96P50 DUX4L12-201ENST00000614593 1267 ntBASIC28.23■■■□□ 2.11
ACAP3Q96P50 DUX4L14-201ENST00000621227 1267 ntBASIC28.23■■■□□ 2.11
ACAP3Q96P50 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ACAP3Q96P50 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.22■■■□□ 2.11
ACAP3Q96P50 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
ACAP3Q96P50 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.21■■■□□ 2.11
ACAP3Q96P50 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.21■■■□□ 2.11
ACAP3Q96P50 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ACAP3Q96P50 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ACAP3Q96P50 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.21■■■□□ 2.11
ACAP3Q96P50 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.2■■■□□ 2.1
ACAP3Q96P50 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ACAP3Q96P50 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.19■■■□□ 2.1
ACAP3Q96P50 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.19■■■□□ 2.1
ACAP3Q96P50 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.18■■■□□ 2.1
ACAP3Q96P50 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.18■■■□□ 2.1
ACAP3Q96P50 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.18■■■□□ 2.1
ACAP3Q96P50 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.18■■■□□ 2.1
ACAP3Q96P50 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
ACAP3Q96P50 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
ACAP3Q96P50 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.17■■■□□ 2.1
ACAP3Q96P50 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.17■■■□□ 2.1
ACAP3Q96P50 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ACAP3Q96P50 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.16■■■□□ 2.1
ACAP3Q96P50 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ACAP3Q96P50 HLA-V-202ENST00000446817 847 ntBASIC28.15■■■□□ 2.1
ACAP3Q96P50 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
ACAP3Q96P50 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.14■■■□□ 2.1
ACAP3Q96P50 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.14■■■□□ 2.1
ACAP3Q96P50 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.13■■■□□ 2.09
ACAP3Q96P50 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ACAP3Q96P50 MIR3648-2-201ENST00000581792 180 ntBASIC28.13■■■□□ 2.09
ACAP3Q96P50 MIR3648-1-201ENST00000615959 180 ntBASIC28.13■■■□□ 2.09
ACAP3Q96P50 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
ACAP3Q96P50 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ACAP3Q96P50 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.12■■■□□ 2.09
ACAP3Q96P50 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.12■■■□□ 2.09
ACAP3Q96P50 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ACAP3Q96P50 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ACAP3Q96P50 DUX4L13-201ENST00000554103 1267 ntBASIC28.1■■■□□ 2.09
ACAP3Q96P50 DUX4L15-201ENST00000611059 1267 ntBASIC28.1■■■□□ 2.09
ACAP3Q96P50 DUX4L23-201ENST00000615195 1269 ntBASIC28.1■■■□□ 2.09
ACAP3Q96P50 DUX4L24-201ENST00000617576 1269 ntBASIC28.1■■■□□ 2.09
ACAP3Q96P50 DUX4L22-201ENST00000618238 1269 ntBASIC28.1■■■□□ 2.09
ACAP3Q96P50 DUX4L20-201ENST00000619712 1269 ntBASIC28.1■■■□□ 2.09
ACAP3Q96P50 DUX4L21-201ENST00000622058 1269 ntBASIC28.1■■■□□ 2.09
ACAP3Q96P50 DUX4L10-201ENST00000622460 1267 ntBASIC28.1■■■□□ 2.09
ACAP3Q96P50 DUX4L25-201ENST00000624915 1269 ntBASIC28.1■■■□□ 2.09
ACAP3Q96P50 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ACAP3Q96P50 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ACAP3Q96P50 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ACAP3Q96P50 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
ACAP3Q96P50 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.08■■■□□ 2.09
ACAP3Q96P50 AC016575.1-201ENST00000607026 382 ntBASIC28.08■■■□□ 2.09
ACAP3Q96P50 CR559946.2-201ENST00000623684 991 ntBASIC28.08■■■□□ 2.09
ACAP3Q96P50 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.08■■■□□ 2.09
ACAP3Q96P50 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ACAP3Q96P50 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ACAP3Q96P50 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
ACAP3Q96P50 AC135983.2-203ENST00000454486 1613 ntBASIC28.07■■■□□ 2.08
ACAP3Q96P50 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
ACAP3Q96P50 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
ACAP3Q96P50 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ACAP3Q96P50 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
ACAP3Q96P50 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.07■■■□□ 2.08
ACAP3Q96P50 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
ACAP3Q96P50 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ACAP3Q96P50 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ACAP3Q96P50 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ACAP3Q96P50 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ACAP3Q96P50 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ACAP3Q96P50 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ACAP3Q96P50 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ACAP3Q96P50 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
ACAP3Q96P50 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
ACAP3Q96P50 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
ACAP3Q96P50 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.04■■■□□ 2.08
ACAP3Q96P50 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.04■■■□□ 2.08
ACAP3Q96P50 WHAMMP2-203ENST00000563942 1603 ntBASIC28.03■■■□□ 2.08
ACAP3Q96P50 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ACAP3Q96P50 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ACAP3Q96P50 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.02■■■□□ 2.08
ACAP3Q96P50 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.02■■■□□ 2.08
ACAP3Q96P50 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
ACAP3Q96P50 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.01■■■□□ 2.07
ACAP3Q96P50 ABCB10P1-201ENST00000614297 2181 ntBASIC28■■■□□ 2.07
ACAP3Q96P50 MIR639-201ENST00000384974 98 ntBASIC28■■■□□ 2.07
ACAP3Q96P50 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms