Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.78■■■□□ 2.52
DDX11Q96FC9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
DDX11Q96FC9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
DDX11Q96FC9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
DDX11Q96FC9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
DDX11Q96FC9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
DDX11Q96FC9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
DDX11Q96FC9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
DDX11Q96FC9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.74■■■□□ 2.51
DDX11Q96FC9 AC108673.1-201ENST00000510422 1159 ntBASIC30.74■■■□□ 2.51
DDX11Q96FC9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
DDX11Q96FC9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
DDX11Q96FC9 AC021231.2-201ENST00000594613 730 ntBASIC30.73■■■□□ 2.51
DDX11Q96FC9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
DDX11Q96FC9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
DDX11Q96FC9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
DDX11Q96FC9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
DDX11Q96FC9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
DDX11Q96FC9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
DDX11Q96FC9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
DDX11Q96FC9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
DDX11Q96FC9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.69■■■□□ 2.5
DDX11Q96FC9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
DDX11Q96FC9 AC010864.1-201ENST00000609407 1511 ntBASIC30.68■■■□□ 2.5
DDX11Q96FC9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
DDX11Q96FC9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.68■■■□□ 2.5
DDX11Q96FC9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
DDX11Q96FC9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
DDX11Q96FC9 MIR6090-201ENST00000622481 60 ntBASIC30.68■■■□□ 2.5
DDX11Q96FC9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
DDX11Q96FC9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
DDX11Q96FC9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
DDX11Q96FC9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.66■■■□□ 2.5
DDX11Q96FC9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.66■■■□□ 2.5
DDX11Q96FC9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
DDX11Q96FC9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.66■■■□□ 2.5
DDX11Q96FC9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.65■■■□□ 2.5
DDX11Q96FC9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.65■■■□□ 2.5
DDX11Q96FC9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.64■■■□□ 2.5
DDX11Q96FC9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
DDX11Q96FC9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
DDX11Q96FC9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
DDX11Q96FC9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
DDX11Q96FC9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
DDX11Q96FC9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DDX11Q96FC9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
DDX11Q96FC9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
DDX11Q96FC9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
DDX11Q96FC9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.59■■■□□ 2.49
DDX11Q96FC9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.59■■■□□ 2.49
DDX11Q96FC9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
DDX11Q96FC9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
DDX11Q96FC9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
DDX11Q96FC9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
DDX11Q96FC9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
DDX11Q96FC9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
DDX11Q96FC9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
DDX11Q96FC9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
DDX11Q96FC9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
DDX11Q96FC9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
DDX11Q96FC9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
DDX11Q96FC9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.52■■■□□ 2.48
DDX11Q96FC9 AL139393.2-201ENST00000608721 2025 ntBASIC30.52■■■□□ 2.48
DDX11Q96FC9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
DDX11Q96FC9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.51■■■□□ 2.47
DDX11Q96FC9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
DDX11Q96FC9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
DDX11Q96FC9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.49■■■□□ 2.47
DDX11Q96FC9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
DDX11Q96FC9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.49■■■□□ 2.47
DDX11Q96FC9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
DDX11Q96FC9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX11Q96FC9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX11Q96FC9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX11Q96FC9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.48■■■□□ 2.47
DDX11Q96FC9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
DDX11Q96FC9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
DDX11Q96FC9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
DDX11Q96FC9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
DDX11Q96FC9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
DDX11Q96FC9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.47■■■□□ 2.47
DDX11Q96FC9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
DDX11Q96FC9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.46■■■□□ 2.47
DDX11Q96FC9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
DDX11Q96FC9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
DDX11Q96FC9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
DDX11Q96FC9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.45■■■□□ 2.46
DDX11Q96FC9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
DDX11Q96FC9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DDX11Q96FC9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DDX11Q96FC9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DDX11Q96FC9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
DDX11Q96FC9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
DDX11Q96FC9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.42■■■□□ 2.46
DDX11Q96FC9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
DDX11Q96FC9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
DDX11Q96FC9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
DDX11Q96FC9 MIR639-201ENST00000384974 98 ntBASIC30.41■■■□□ 2.46
DDX11Q96FC9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.41■■■□□ 2.46
DDX11Q96FC9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms