Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
XRN1Q8IZH2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
XRN1Q8IZH2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
XRN1Q8IZH2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
XRN1Q8IZH2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC37.1■■■■□ 3.53
XRN1Q8IZH2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC37.1■■■■□ 3.53
XRN1Q8IZH2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC37.09■■■■□ 3.53
XRN1Q8IZH2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC37.08■■■■□ 3.53
XRN1Q8IZH2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
XRN1Q8IZH2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
XRN1Q8IZH2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC37.05■■■■□ 3.52
XRN1Q8IZH2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC37.05■■■■□ 3.52
XRN1Q8IZH2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC37.03■■■■□ 3.52
XRN1Q8IZH2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC37.03■■■■□ 3.52
XRN1Q8IZH2 NTF6A-201ENST00000591175 560 ntBASIC37.02■■■■□ 3.52
XRN1Q8IZH2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
XRN1Q8IZH2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
XRN1Q8IZH2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC37.02■■■■□ 3.52
XRN1Q8IZH2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC37.02■■■■□ 3.52
XRN1Q8IZH2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC37.01■■■■□ 3.52
XRN1Q8IZH2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC37.01■■■■□ 3.52
XRN1Q8IZH2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC37.01■■■■□ 3.51
XRN1Q8IZH2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC37.01■■■■□ 3.51
XRN1Q8IZH2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC37■■■■□ 3.51
XRN1Q8IZH2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC37■■■■□ 3.51
XRN1Q8IZH2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC37■■■■□ 3.51
XRN1Q8IZH2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
XRN1Q8IZH2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
XRN1Q8IZH2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
XRN1Q8IZH2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
XRN1Q8IZH2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
XRN1Q8IZH2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
XRN1Q8IZH2 AC012354.3-201ENST00000623734 483 ntBASIC36.96■■■■□ 3.51
XRN1Q8IZH2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
XRN1Q8IZH2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC36.94■■■■□ 3.5
XRN1Q8IZH2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
XRN1Q8IZH2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC36.93■■■■□ 3.5
XRN1Q8IZH2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
XRN1Q8IZH2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
XRN1Q8IZH2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
XRN1Q8IZH2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC36.91■■■■□ 3.5
XRN1Q8IZH2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC36.91■■■■□ 3.5
XRN1Q8IZH2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC36.91■■■■□ 3.5
XRN1Q8IZH2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC36.9■■■■□ 3.5
XRN1Q8IZH2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC36.9■■■■□ 3.5
XRN1Q8IZH2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC36.9■■■■□ 3.5
XRN1Q8IZH2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC36.89■■■■□ 3.5
XRN1Q8IZH2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
XRN1Q8IZH2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
XRN1Q8IZH2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC36.88■■■■□ 3.49
XRN1Q8IZH2 AC010864.1-201ENST00000609407 1511 ntBASIC36.88■■■■□ 3.49
XRN1Q8IZH2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
XRN1Q8IZH2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
XRN1Q8IZH2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
XRN1Q8IZH2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC36.84■■■■□ 3.49
XRN1Q8IZH2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
XRN1Q8IZH2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
XRN1Q8IZH2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC36.83■■■■□ 3.49
XRN1Q8IZH2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC36.83■■■■□ 3.49
XRN1Q8IZH2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
XRN1Q8IZH2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC36.82■■■■□ 3.49
XRN1Q8IZH2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC36.82■■■■□ 3.49
XRN1Q8IZH2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
XRN1Q8IZH2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
XRN1Q8IZH2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
XRN1Q8IZH2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC36.81■■■■□ 3.48
XRN1Q8IZH2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC36.8■■■■□ 3.48
XRN1Q8IZH2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
XRN1Q8IZH2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
XRN1Q8IZH2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
XRN1Q8IZH2 AL161658.1-201ENST00000623641 1967 ntBASIC36.79■■■■□ 3.48
XRN1Q8IZH2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
XRN1Q8IZH2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC36.79■■■■□ 3.48
XRN1Q8IZH2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC36.78■■■■□ 3.48
XRN1Q8IZH2 AC022413.1-201ENST00000624602 984 ntBASIC36.78■■■■□ 3.48
XRN1Q8IZH2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC36.78■■■■□ 3.48
XRN1Q8IZH2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC36.77■■■■□ 3.48
XRN1Q8IZH2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC36.76■■■■□ 3.48
XRN1Q8IZH2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC36.76■■■■□ 3.47
XRN1Q8IZH2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC36.75■■■■□ 3.47
XRN1Q8IZH2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC36.74■■■■□ 3.47
XRN1Q8IZH2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
XRN1Q8IZH2 AC008813.1-201ENST00000536597 885 ntBASIC36.73■■■■□ 3.47
XRN1Q8IZH2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
XRN1Q8IZH2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC36.73■■■■□ 3.47
XRN1Q8IZH2 AC060814.1-201ENST00000554326 538 ntBASIC36.72■■■■□ 3.47
XRN1Q8IZH2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC36.71■■■■□ 3.47
XRN1Q8IZH2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC36.7■■■■□ 3.47
XRN1Q8IZH2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
XRN1Q8IZH2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
XRN1Q8IZH2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
XRN1Q8IZH2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC36.68■■■■□ 3.46
XRN1Q8IZH2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC36.68■■■■□ 3.46
XRN1Q8IZH2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC36.67■■■■□ 3.46
XRN1Q8IZH2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC36.67■■■■□ 3.46
XRN1Q8IZH2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC36.67■■■■□ 3.46
XRN1Q8IZH2 AC018358.1-201ENST00000631079 1402 ntBASIC36.67■■■■□ 3.46
XRN1Q8IZH2 WHAMMP2-203ENST00000563942 1603 ntBASIC36.67■■■■□ 3.46
XRN1Q8IZH2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
XRN1Q8IZH2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms