Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.88■■□□□ 1.25
LINC00346Q8IVM7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LINC00346Q8IVM7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
LINC00346Q8IVM7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LINC00346Q8IVM7 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.87■■□□□ 1.25
LINC00346Q8IVM7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.87■■□□□ 1.25
LINC00346Q8IVM7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
LINC00346Q8IVM7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
LINC00346Q8IVM7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
LINC00346Q8IVM7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
LINC00346Q8IVM7 AC127502.1-201ENST00000399971 1502 ntBASIC22.86■■□□□ 1.25
LINC00346Q8IVM7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LINC00346Q8IVM7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.86■■□□□ 1.25
LINC00346Q8IVM7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LINC00346Q8IVM7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
LINC00346Q8IVM7 DRD5P2-201ENST00000421395 2012 ntBASIC22.85■■□□□ 1.25
LINC00346Q8IVM7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
LINC00346Q8IVM7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LINC00346Q8IVM7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LINC00346Q8IVM7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
LINC00346Q8IVM7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LINC00346Q8IVM7 AC142086.6-201ENST00000621154 1765 ntBASIC22.84■■□□□ 1.25
LINC00346Q8IVM7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.83■■□□□ 1.25
LINC00346Q8IVM7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LINC00346Q8IVM7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LINC00346Q8IVM7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
LINC00346Q8IVM7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.83■■□□□ 1.24
LINC00346Q8IVM7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LINC00346Q8IVM7 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.82■■□□□ 1.24
LINC00346Q8IVM7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LINC00346Q8IVM7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LINC00346Q8IVM7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.81■■□□□ 1.24
LINC00346Q8IVM7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
LINC00346Q8IVM7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
LINC00346Q8IVM7 AC005559.1-201ENST00000589661 871 ntBASIC22.81■■□□□ 1.24
LINC00346Q8IVM7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LINC00346Q8IVM7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.81■■□□□ 1.24
LINC00346Q8IVM7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LINC00346Q8IVM7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LINC00346Q8IVM7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LINC00346Q8IVM7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
LINC00346Q8IVM7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.79■■□□□ 1.24
LINC00346Q8IVM7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
LINC00346Q8IVM7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LINC00346Q8IVM7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.79■■□□□ 1.24
LINC00346Q8IVM7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LINC00346Q8IVM7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LINC00346Q8IVM7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
LINC00346Q8IVM7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LINC00346Q8IVM7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
LINC00346Q8IVM7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
LINC00346Q8IVM7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
LINC00346Q8IVM7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LINC00346Q8IVM7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LINC00346Q8IVM7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
LINC00346Q8IVM7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LINC00346Q8IVM7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LINC00346Q8IVM7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.76■■□□□ 1.23
LINC00346Q8IVM7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.76■■□□□ 1.23
LINC00346Q8IVM7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
LINC00346Q8IVM7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.75■■□□□ 1.23
LINC00346Q8IVM7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LINC00346Q8IVM7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LINC00346Q8IVM7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
LINC00346Q8IVM7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LINC00346Q8IVM7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LINC00346Q8IVM7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.74■■□□□ 1.23
LINC00346Q8IVM7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.74■■□□□ 1.23
LINC00346Q8IVM7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LINC00346Q8IVM7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.74■■□□□ 1.23
LINC00346Q8IVM7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.74■■□□□ 1.23
LINC00346Q8IVM7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
LINC00346Q8IVM7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LINC00346Q8IVM7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LINC00346Q8IVM7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
LINC00346Q8IVM7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LINC00346Q8IVM7 AP004833.2-201ENST00000532228 1454 ntBASIC22.71■■□□□ 1.23
LINC00346Q8IVM7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.7■■□□□ 1.22
LINC00346Q8IVM7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
LINC00346Q8IVM7 DUX4L28-201ENST00000623687 678 ntBASIC22.7■■□□□ 1.22
LINC00346Q8IVM7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LINC00346Q8IVM7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LINC00346Q8IVM7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
LINC00346Q8IVM7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
LINC00346Q8IVM7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.69■■□□□ 1.22
LINC00346Q8IVM7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.69■■□□□ 1.22
LINC00346Q8IVM7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LINC00346Q8IVM7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LINC00346Q8IVM7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
LINC00346Q8IVM7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LINC00346Q8IVM7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.68■■□□□ 1.22
LINC00346Q8IVM7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.68■■□□□ 1.22
LINC00346Q8IVM7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LINC00346Q8IVM7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LINC00346Q8IVM7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.66■■□□□ 1.22
LINC00346Q8IVM7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.66■■□□□ 1.22
LINC00346Q8IVM7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.66■■□□□ 1.22
LINC00346Q8IVM7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
LINC00346Q8IVM7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINC00346Q8IVM7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms