Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TPGS2Q68CL5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
TPGS2Q68CL5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
TPGS2Q68CL5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
TPGS2Q68CL5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
TPGS2Q68CL5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.59■■■□□ 2.01
TPGS2Q68CL5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TPGS2Q68CL5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.58■■■□□ 2.01
TPGS2Q68CL5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.57■■■□□ 2
TPGS2Q68CL5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.57■■■□□ 2
TPGS2Q68CL5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TPGS2Q68CL5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.56■■■□□ 2
TPGS2Q68CL5 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.55■■■□□ 2
TPGS2Q68CL5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.55■■■□□ 2
TPGS2Q68CL5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.55■■■□□ 2
TPGS2Q68CL5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.54■■■□□ 2
TPGS2Q68CL5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
TPGS2Q68CL5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.53■■■□□ 2
TPGS2Q68CL5 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TPGS2Q68CL5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
TPGS2Q68CL5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.52■■■□□ 2
TPGS2Q68CL5 AL135925.1-201ENST00000605920 1701 ntBASIC27.51■■□□□ 1.99
TPGS2Q68CL5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TPGS2Q68CL5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
TPGS2Q68CL5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TPGS2Q68CL5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.5■■□□□ 1.99
TPGS2Q68CL5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
TPGS2Q68CL5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
TPGS2Q68CL5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TPGS2Q68CL5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TPGS2Q68CL5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.48■■□□□ 1.99
TPGS2Q68CL5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TPGS2Q68CL5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TPGS2Q68CL5 AC127502.1-201ENST00000399971 1502 ntBASIC27.47■■□□□ 1.99
TPGS2Q68CL5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.47■■□□□ 1.99
TPGS2Q68CL5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.46■■□□□ 1.99
TPGS2Q68CL5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.46■■□□□ 1.99
TPGS2Q68CL5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
TPGS2Q68CL5 HSD17B1P1-201ENST00000590052 955 ntBASIC27.45■■□□□ 1.98
TPGS2Q68CL5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
TPGS2Q68CL5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TPGS2Q68CL5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
TPGS2Q68CL5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TPGS2Q68CL5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.41■■□□□ 1.98
TPGS2Q68CL5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
TPGS2Q68CL5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TPGS2Q68CL5 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.4■■□□□ 1.98
TPGS2Q68CL5 AC135983.2-203ENST00000454486 1613 ntBASIC27.38■■□□□ 1.97
TPGS2Q68CL5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.38■■□□□ 1.97
TPGS2Q68CL5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.37■■□□□ 1.97
TPGS2Q68CL5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
TPGS2Q68CL5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.37■■□□□ 1.97
TPGS2Q68CL5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TPGS2Q68CL5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
TPGS2Q68CL5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
TPGS2Q68CL5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
TPGS2Q68CL5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TPGS2Q68CL5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.34■■□□□ 1.97
TPGS2Q68CL5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TPGS2Q68CL5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TPGS2Q68CL5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.33■■□□□ 1.97
TPGS2Q68CL5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TPGS2Q68CL5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
TPGS2Q68CL5 WHAMMP2-203ENST00000563942 1603 ntBASIC27.33■■□□□ 1.97
TPGS2Q68CL5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TPGS2Q68CL5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TPGS2Q68CL5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TPGS2Q68CL5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.32■■□□□ 1.96
TPGS2Q68CL5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
TPGS2Q68CL5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TPGS2Q68CL5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.31■■□□□ 1.96
TPGS2Q68CL5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
TPGS2Q68CL5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TPGS2Q68CL5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.3■■□□□ 1.96
TPGS2Q68CL5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
TPGS2Q68CL5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TPGS2Q68CL5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
TPGS2Q68CL5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
TPGS2Q68CL5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
TPGS2Q68CL5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TPGS2Q68CL5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.28■■□□□ 1.96
TPGS2Q68CL5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.27■■□□□ 1.96
TPGS2Q68CL5 AC008813.1-201ENST00000536597 885 ntBASIC27.27■■□□□ 1.96
TPGS2Q68CL5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.27■■□□□ 1.96
TPGS2Q68CL5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TPGS2Q68CL5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
TPGS2Q68CL5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
TPGS2Q68CL5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.25■■□□□ 1.95
TPGS2Q68CL5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms