Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
TTC39AQ5SRH9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.8■■■□□ 2.68
TTC39AQ5SRH9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
TTC39AQ5SRH9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.77■■■□□ 2.68
TTC39AQ5SRH9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TTC39AQ5SRH9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
TTC39AQ5SRH9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.76■■■□□ 2.67
TTC39AQ5SRH9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.75■■■□□ 2.67
TTC39AQ5SRH9 LINC01971-201ENST00000617888 1048 ntBASIC31.75■■■□□ 2.67
TTC39AQ5SRH9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.73■■■□□ 2.67
TTC39AQ5SRH9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
TTC39AQ5SRH9 LINC00273-201ENST00000539813 1452 ntBASIC31.72■■■□□ 2.67
TTC39AQ5SRH9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
TTC39AQ5SRH9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.71■■■□□ 2.67
TTC39AQ5SRH9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
TTC39AQ5SRH9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.7■■■□□ 2.67
TTC39AQ5SRH9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TTC39AQ5SRH9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TTC39AQ5SRH9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.69■■■□□ 2.66
TTC39AQ5SRH9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
TTC39AQ5SRH9 DUX4L11-201ENST00000611504 1267 ntBASIC31.68■■■□□ 2.66
TTC39AQ5SRH9 DUX4L12-201ENST00000614593 1267 ntBASIC31.68■■■□□ 2.66
TTC39AQ5SRH9 DUX4L14-201ENST00000621227 1267 ntBASIC31.68■■■□□ 2.66
TTC39AQ5SRH9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.67■■■□□ 2.66
TTC39AQ5SRH9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.67■■■□□ 2.66
TTC39AQ5SRH9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.66■■■□□ 2.66
TTC39AQ5SRH9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TTC39AQ5SRH9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
TTC39AQ5SRH9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TTC39AQ5SRH9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TTC39AQ5SRH9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.63■■■□□ 2.65
TTC39AQ5SRH9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TTC39AQ5SRH9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TTC39AQ5SRH9 ABCB10P1-201ENST00000614297 2181 ntBASIC31.61■■■□□ 2.65
TTC39AQ5SRH9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TTC39AQ5SRH9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
TTC39AQ5SRH9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.61■■■□□ 2.65
TTC39AQ5SRH9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.61■■■□□ 2.65
TTC39AQ5SRH9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TTC39AQ5SRH9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
TTC39AQ5SRH9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.6■■■□□ 2.65
TTC39AQ5SRH9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
TTC39AQ5SRH9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TTC39AQ5SRH9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
TTC39AQ5SRH9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.59■■■□□ 2.65
TTC39AQ5SRH9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.59■■■□□ 2.65
TTC39AQ5SRH9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
TTC39AQ5SRH9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.58■■■□□ 2.65
TTC39AQ5SRH9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TTC39AQ5SRH9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.57■■■□□ 2.64
TTC39AQ5SRH9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.57■■■□□ 2.64
TTC39AQ5SRH9 HLA-V-202ENST00000446817 847 ntBASIC31.56■■■□□ 2.64
TTC39AQ5SRH9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.56■■■□□ 2.64
TTC39AQ5SRH9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TTC39AQ5SRH9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
TTC39AQ5SRH9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TTC39AQ5SRH9 AC135983.2-203ENST00000454486 1613 ntBASIC31.55■■■□□ 2.64
TTC39AQ5SRH9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TTC39AQ5SRH9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
TTC39AQ5SRH9 WHAMMP2-203ENST00000563942 1603 ntBASIC31.54■■■□□ 2.64
TTC39AQ5SRH9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.54■■■□□ 2.64
TTC39AQ5SRH9 MIR3648-2-201ENST00000581792 180 ntBASIC31.54■■■□□ 2.64
TTC39AQ5SRH9 MIR3648-1-201ENST00000615959 180 ntBASIC31.54■■■□□ 2.64
TTC39AQ5SRH9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.54■■■□□ 2.64
TTC39AQ5SRH9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 DUX4L13-201ENST00000554103 1267 ntBASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 DUX4L15-201ENST00000611059 1267 ntBASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 DUX4L23-201ENST00000615195 1269 ntBASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 DUX4L24-201ENST00000617576 1269 ntBASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 DUX4L22-201ENST00000618238 1269 ntBASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 DUX4L20-201ENST00000619712 1269 ntBASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 DUX4L21-201ENST00000622058 1269 ntBASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 DUX4L10-201ENST00000622460 1267 ntBASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 DUX4L25-201ENST00000624915 1269 ntBASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
TTC39AQ5SRH9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
TTC39AQ5SRH9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TTC39AQ5SRH9 CR559946.2-201ENST00000623684 991 ntBASIC31.52■■■□□ 2.64
TTC39AQ5SRH9 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.52■■■□□ 2.64
TTC39AQ5SRH9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TTC39AQ5SRH9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
TTC39AQ5SRH9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TTC39AQ5SRH9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.51■■■□□ 2.63
TTC39AQ5SRH9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TTC39AQ5SRH9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
TTC39AQ5SRH9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TTC39AQ5SRH9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.5■■■□□ 2.63
TTC39AQ5SRH9 AC016575.1-201ENST00000607026 382 ntBASIC31.5■■■□□ 2.63
TTC39AQ5SRH9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.49■■■□□ 2.63
TTC39AQ5SRH9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TTC39AQ5SRH9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
TTC39AQ5SRH9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.49■■■□□ 2.63
TTC39AQ5SRH9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.49■■■□□ 2.63
TTC39AQ5SRH9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
TTC39AQ5SRH9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TTC39AQ5SRH9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TTC39AQ5SRH9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TTC39AQ5SRH9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TTC39AQ5SRH9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms