Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.53■■□□□ 1.36
KRTCAP3Q53RY4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.53■■□□□ 1.36
KRTCAP3Q53RY4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KRTCAP3Q53RY4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRTCAP3Q53RY4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRTCAP3Q53RY4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
KRTCAP3Q53RY4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRTCAP3Q53RY4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KRTCAP3Q53RY4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.51■■□□□ 1.35
KRTCAP3Q53RY4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.51■■□□□ 1.35
KRTCAP3Q53RY4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.51■■□□□ 1.35
KRTCAP3Q53RY4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRTCAP3Q53RY4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRTCAP3Q53RY4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.48■■□□□ 1.35
KRTCAP3Q53RY4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KRTCAP3Q53RY4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.47■■□□□ 1.35
KRTCAP3Q53RY4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
KRTCAP3Q53RY4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KRTCAP3Q53RY4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
KRTCAP3Q53RY4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
KRTCAP3Q53RY4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
KRTCAP3Q53RY4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.44■■□□□ 1.34
KRTCAP3Q53RY4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.44■■□□□ 1.34
KRTCAP3Q53RY4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.44■■□□□ 1.34
KRTCAP3Q53RY4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KRTCAP3Q53RY4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KRTCAP3Q53RY4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
KRTCAP3Q53RY4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KRTCAP3Q53RY4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
KRTCAP3Q53RY4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRTCAP3Q53RY4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.4■■□□□ 1.34
KRTCAP3Q53RY4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KRTCAP3Q53RY4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
KRTCAP3Q53RY4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KRTCAP3Q53RY4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
KRTCAP3Q53RY4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
KRTCAP3Q53RY4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
KRTCAP3Q53RY4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.38■■□□□ 1.33
KRTCAP3Q53RY4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
KRTCAP3Q53RY4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.38■■□□□ 1.33
KRTCAP3Q53RY4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
KRTCAP3Q53RY4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KRTCAP3Q53RY4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KRTCAP3Q53RY4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.37■■□□□ 1.33
KRTCAP3Q53RY4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
KRTCAP3Q53RY4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KRTCAP3Q53RY4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
KRTCAP3Q53RY4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRTCAP3Q53RY4 AC008813.1-201ENST00000536597 885 ntBASIC23.35■■□□□ 1.33
KRTCAP3Q53RY4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KRTCAP3Q53RY4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.34■■□□□ 1.33
KRTCAP3Q53RY4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KRTCAP3Q53RY4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KRTCAP3Q53RY4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.33■■□□□ 1.33
KRTCAP3Q53RY4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
KRTCAP3Q53RY4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
KRTCAP3Q53RY4 GPX1-201ENST00000419349 1106 ntBASIC23.32■■□□□ 1.32
KRTCAP3Q53RY4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRTCAP3Q53RY4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KRTCAP3Q53RY4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.31■■□□□ 1.32
KRTCAP3Q53RY4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRTCAP3Q53RY4 AC127502.1-201ENST00000399971 1502 ntBASIC23.3■■□□□ 1.32
KRTCAP3Q53RY4 RARRES2P2-201ENST00000394842 485 ntBASIC23.3■■□□□ 1.32
KRTCAP3Q53RY4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.3■■□□□ 1.32
KRTCAP3Q53RY4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
KRTCAP3Q53RY4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRTCAP3Q53RY4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.28■■□□□ 1.32
KRTCAP3Q53RY4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRTCAP3Q53RY4 RNF126P1-201ENST00000567452 1320 ntBASIC23.28■■□□□ 1.32
KRTCAP3Q53RY4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRTCAP3Q53RY4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRTCAP3Q53RY4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.27■■□□□ 1.32
KRTCAP3Q53RY4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
KRTCAP3Q53RY4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.27■■□□□ 1.32
KRTCAP3Q53RY4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.26■■□□□ 1.31
KRTCAP3Q53RY4 AC135983.2-203ENST00000454486 1613 ntBASIC23.26■■□□□ 1.31
KRTCAP3Q53RY4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.26■■□□□ 1.31
KRTCAP3Q53RY4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
KRTCAP3Q53RY4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
KRTCAP3Q53RY4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
KRTCAP3Q53RY4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KRTCAP3Q53RY4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KRTCAP3Q53RY4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
KRTCAP3Q53RY4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KRTCAP3Q53RY4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.23■■□□□ 1.31
KRTCAP3Q53RY4 AL135925.1-201ENST00000605920 1701 ntBASIC23.23■■□□□ 1.31
KRTCAP3Q53RY4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KRTCAP3Q53RY4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.23■■□□□ 1.31
KRTCAP3Q53RY4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
KRTCAP3Q53RY4 ABHD17AP5-201ENST00000580133 923 ntBASIC23.23■■□□□ 1.31
KRTCAP3Q53RY4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms