Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.65■■■□□ 2.66
PDS5AQ29RF7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PDS5AQ29RF7 MIR4449-201ENST00000578365 66 ntBASIC31.64■■■□□ 2.66
PDS5AQ29RF7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.64■■■□□ 2.65
PDS5AQ29RF7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.63■■■□□ 2.65
PDS5AQ29RF7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.62■■■□□ 2.65
PDS5AQ29RF7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.62■■■□□ 2.65
PDS5AQ29RF7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PDS5AQ29RF7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PDS5AQ29RF7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PDS5AQ29RF7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.6■■■□□ 2.65
PDS5AQ29RF7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDS5AQ29RF7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
PDS5AQ29RF7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDS5AQ29RF7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDS5AQ29RF7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
PDS5AQ29RF7 AC127502.1-201ENST00000399971 1502 ntBASIC31.58■■■□□ 2.65
PDS5AQ29RF7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
PDS5AQ29RF7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDS5AQ29RF7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.56■■■□□ 2.64
PDS5AQ29RF7 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.56■■■□□ 2.64
PDS5AQ29RF7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PDS5AQ29RF7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
PDS5AQ29RF7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDS5AQ29RF7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDS5AQ29RF7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PDS5AQ29RF7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
PDS5AQ29RF7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.52■■■□□ 2.64
PDS5AQ29RF7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PDS5AQ29RF7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDS5AQ29RF7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PDS5AQ29RF7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
PDS5AQ29RF7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.5■■■□□ 2.63
PDS5AQ29RF7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
PDS5AQ29RF7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PDS5AQ29RF7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDS5AQ29RF7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
PDS5AQ29RF7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDS5AQ29RF7 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.47■■■□□ 2.63
PDS5AQ29RF7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDS5AQ29RF7 AC135983.2-203ENST00000454486 1613 ntBASIC31.46■■■□□ 2.63
PDS5AQ29RF7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
PDS5AQ29RF7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDS5AQ29RF7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
PDS5AQ29RF7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDS5AQ29RF7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDS5AQ29RF7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.42■■■□□ 2.62
PDS5AQ29RF7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.42■■■□□ 2.62
PDS5AQ29RF7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDS5AQ29RF7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
PDS5AQ29RF7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PDS5AQ29RF7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.4■■■□□ 2.62
PDS5AQ29RF7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
PDS5AQ29RF7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.39■■■□□ 2.62
PDS5AQ29RF7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PDS5AQ29RF7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PDS5AQ29RF7 WHAMMP2-203ENST00000563942 1603 ntBASIC31.39■■■□□ 2.61
PDS5AQ29RF7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 ST7-AS1-201ENST00000456775 1889 ntBASIC31.38■■■□□ 2.61
PDS5AQ29RF7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PDS5AQ29RF7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PDS5AQ29RF7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PDS5AQ29RF7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
PDS5AQ29RF7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PDS5AQ29RF7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.34■■■□□ 2.61
PDS5AQ29RF7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
PDS5AQ29RF7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.33■■■□□ 2.61
PDS5AQ29RF7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.33■■■□□ 2.61
PDS5AQ29RF7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PDS5AQ29RF7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PDS5AQ29RF7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PDS5AQ29RF7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PDS5AQ29RF7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.3■■■□□ 2.6
PDS5AQ29RF7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDS5AQ29RF7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDS5AQ29RF7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDS5AQ29RF7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.27■■■□□ 2.6
PDS5AQ29RF7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.27■■■□□ 2.6
PDS5AQ29RF7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
PDS5AQ29RF7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
PDS5AQ29RF7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
PDS5AQ29RF7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
PDS5AQ29RF7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PDS5AQ29RF7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms