Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST1H2BDP58876 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.88■□□□□ 0.77
HIST1H2BDP58876 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST1H2BDP58876 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST1H2BDP58876 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIST1H2BDP58876 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIST1H2BDP58876 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.86■□□□□ 0.77
HIST1H2BDP58876 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIST1H2BDP58876 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIST1H2BDP58876 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIST1H2BDP58876 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIST1H2BDP58876 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HIST1H2BDP58876 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIST1H2BDP58876 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIST1H2BDP58876 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIST1H2BDP58876 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIST1H2BDP58876 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.84■□□□□ 0.77
HIST1H2BDP58876 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
HIST1H2BDP58876 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST1H2BDP58876 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIST1H2BDP58876 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HIST1H2BDP58876 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HIST1H2BDP58876 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H2BDP58876 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H2BDP58876 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H2BDP58876 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H2BDP58876 AC020928.2-201ENST00000588717 2197 ntBASIC19.81■□□□□ 0.76
HIST1H2BDP58876 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.81■□□□□ 0.76
HIST1H2BDP58876 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST1H2BDP58876 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST1H2BDP58876 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HIST1H2BDP58876 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H2BDP58876 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H2BDP58876 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H2BDP58876 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HIST1H2BDP58876 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H2BDP58876 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H2BDP58876 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIST1H2BDP58876 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H2BDP58876 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.78■□□□□ 0.76
HIST1H2BDP58876 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.78■□□□□ 0.76
HIST1H2BDP58876 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H2BDP58876 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.77■□□□□ 0.76
HIST1H2BDP58876 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST1H2BDP58876 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST1H2BDP58876 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HIST1H2BDP58876 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST1H2BDP58876 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
HIST1H2BDP58876 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIST1H2BDP58876 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H2BDP58876 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H2BDP58876 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H2BDP58876 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HIST1H2BDP58876 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H2BDP58876 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.76■□□□□ 0.75
HIST1H2BDP58876 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H2BDP58876 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H2BDP58876 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.75■□□□□ 0.75
HIST1H2BDP58876 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HIST1H2BDP58876 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H2BDP58876 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H2BDP58876 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H2BDP58876 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H2BDP58876 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H2BDP58876 AL139393.2-201ENST00000608721 2025 ntBASIC19.74■□□□□ 0.75
HIST1H2BDP58876 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H2BDP58876 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HIST1H2BDP58876 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.73■□□□□ 0.75
HIST1H2BDP58876 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H2BDP58876 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H2BDP58876 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2BDP58876 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2BDP58876 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2BDP58876 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2BDP58876 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2BDP58876 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2BDP58876 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HIST1H2BDP58876 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H2BDP58876 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2BDP58876 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H2BDP58876 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2BDP58876 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2BDP58876 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST1H2BDP58876 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2BDP58876 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HIST1H2BDP58876 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2BDP58876 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HIST1H2BDP58876 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.69■□□□□ 0.74
HIST1H2BDP58876 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2BDP58876 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2BDP58876 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HIST1H2BDP58876 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2BDP58876 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2BDP58876 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2BDP58876 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2BDP58876 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2BDP58876 BX255925.1-201ENST00000566954 1854 ntBASIC19.67■□□□□ 0.74
HIST1H2BDP58876 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2BDP58876 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2BDP58876 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms