Protein–RNA interactions for Protein: P05771

PRKCB, Protein kinase C beta type, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCBP05771 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
PRKCBP05771 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.55■■■□□ 2.16
PRKCBP05771 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PRKCBP05771 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.54■■■□□ 2.16
PRKCBP05771 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.54■■■□□ 2.16
PRKCBP05771 LINC01971-201ENST00000617888 1048 ntBASIC28.53■■■□□ 2.16
PRKCBP05771 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.53■■■□□ 2.16
PRKCBP05771 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PRKCBP05771 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.51■■■□□ 2.15
PRKCBP05771 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
PRKCBP05771 LINC00273-201ENST00000539813 1452 ntBASIC28.51■■■□□ 2.15
PRKCBP05771 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
PRKCBP05771 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PRKCBP05771 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PRKCBP05771 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.47■■■□□ 2.15
PRKCBP05771 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.47■■■□□ 2.15
PRKCBP05771 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PRKCBP05771 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.46■■■□□ 2.15
PRKCBP05771 DUX4L11-201ENST00000611504 1267 ntBASIC28.46■■■□□ 2.15
PRKCBP05771 DUX4L12-201ENST00000614593 1267 ntBASIC28.46■■■□□ 2.15
PRKCBP05771 DUX4L14-201ENST00000621227 1267 ntBASIC28.46■■■□□ 2.15
PRKCBP05771 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
PRKCBP05771 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.45■■■□□ 2.14
PRKCBP05771 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.45■■■□□ 2.14
PRKCBP05771 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
PRKCBP05771 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PRKCBP05771 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PRKCBP05771 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PRKCBP05771 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PRKCBP05771 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.41■■■□□ 2.14
PRKCBP05771 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
PRKCBP05771 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.4■■■□□ 2.14
PRKCBP05771 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.4■■■□□ 2.14
PRKCBP05771 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.4■■■□□ 2.14
PRKCBP05771 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.4■■■□□ 2.14
PRKCBP05771 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
PRKCBP05771 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.39■■■□□ 2.14
PRKCBP05771 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
PRKCBP05771 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PRKCBP05771 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PRKCBP05771 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
PRKCBP05771 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
PRKCBP05771 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.38■■■□□ 2.13
PRKCBP05771 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.38■■■□□ 2.13
PRKCBP05771 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PRKCBP05771 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.37■■■□□ 2.13
PRKCBP05771 HLA-V-202ENST00000446817 847 ntBASIC28.36■■■□□ 2.13
PRKCBP05771 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PRKCBP05771 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.36■■■□□ 2.13
PRKCBP05771 ABCB10P1-201ENST00000614297 2181 ntBASIC28.35■■■□□ 2.13
PRKCBP05771 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
PRKCBP05771 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.35■■■□□ 2.13
PRKCBP05771 AC135983.2-203ENST00000454486 1613 ntBASIC28.35■■■□□ 2.13
PRKCBP05771 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PRKCBP05771 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.34■■■□□ 2.13
PRKCBP05771 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.34■■■□□ 2.13
PRKCBP05771 MIR3648-2-201ENST00000581792 180 ntBASIC28.34■■■□□ 2.13
PRKCBP05771 MIR3648-1-201ENST00000615959 180 ntBASIC28.34■■■□□ 2.13
PRKCBP05771 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PRKCBP05771 WHAMMP2-203ENST00000563942 1603 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 DUX4L13-201ENST00000554103 1267 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 DUX4L15-201ENST00000611059 1267 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 DUX4L23-201ENST00000615195 1269 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 DUX4L24-201ENST00000617576 1269 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 DUX4L22-201ENST00000618238 1269 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 DUX4L20-201ENST00000619712 1269 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 DUX4L21-201ENST00000622058 1269 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 DUX4L10-201ENST00000622460 1267 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 CR559946.2-201ENST00000623684 991 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 DUX4L25-201ENST00000624915 1269 ntBASIC28.33■■■□□ 2.13
PRKCBP05771 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.33■■■□□ 2.13
PRKCBP05771 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.32■■■□□ 2.12
PRKCBP05771 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PRKCBP05771 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
PRKCBP05771 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PRKCBP05771 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
PRKCBP05771 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.31■■■□□ 2.12
PRKCBP05771 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.31■■■□□ 2.12
PRKCBP05771 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PRKCBP05771 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PRKCBP05771 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PRKCBP05771 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
PRKCBP05771 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PRKCBP05771 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PRKCBP05771 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PRKCBP05771 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PRKCBP05771 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
PRKCBP05771 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PRKCBP05771 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PRKCBP05771 AC016575.1-201ENST00000607026 382 ntBASIC28.3■■■□□ 2.12
PRKCBP05771 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PRKCBP05771 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PRKCBP05771 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.29■■■□□ 2.12
PRKCBP05771 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PRKCBP05771 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.28■■■□□ 2.12
PRKCBP05771 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PRKCBP05771 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
PRKCBP05771 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.28■■■□□ 2.12
PRKCBP05771 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PRKCBP05771 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms