Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GAPDHP04406 SUZ12P1-203ENST00000578195 985 ntBASIC21.55■■□□□ 1.04
GAPDHP04406 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GAPDHP04406 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GAPDHP04406 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GAPDHP04406 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.55■■□□□ 1.04
GAPDHP04406 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GAPDHP04406 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GAPDHP04406 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GAPDHP04406 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
GAPDHP04406 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GAPDHP04406 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GAPDHP04406 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GAPDHP04406 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GAPDHP04406 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
GAPDHP04406 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
GAPDHP04406 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GAPDHP04406 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GAPDHP04406 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
GAPDHP04406 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GAPDHP04406 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
GAPDHP04406 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GAPDHP04406 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.48■■□□□ 1.03
GAPDHP04406 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GAPDHP04406 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GAPDHP04406 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
GAPDHP04406 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.47■■□□□ 1.03
GAPDHP04406 MIR762-201ENST00000390236 83 ntBASIC21.47■■□□□ 1.03
GAPDHP04406 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.47■■□□□ 1.03
GAPDHP04406 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GAPDHP04406 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GAPDHP04406 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.47■■□□□ 1.03
GAPDHP04406 AL135925.1-201ENST00000605920 1701 ntBASIC21.46■■□□□ 1.03
GAPDHP04406 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
GAPDHP04406 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
GAPDHP04406 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
GAPDHP04406 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.45■■□□□ 1.02
GAPDHP04406 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.45■■□□□ 1.02
GAPDHP04406 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GAPDHP04406 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.45■■□□□ 1.02
GAPDHP04406 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.44■■□□□ 1.02
GAPDHP04406 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GAPDHP04406 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
GAPDHP04406 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.44■■□□□ 1.02
GAPDHP04406 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GAPDHP04406 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GAPDHP04406 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GAPDHP04406 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.43■■□□□ 1.02
GAPDHP04406 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GAPDHP04406 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GAPDHP04406 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GAPDHP04406 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
GAPDHP04406 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
GAPDHP04406 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GAPDHP04406 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GAPDHP04406 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.4■■□□□ 1.02
GAPDHP04406 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GAPDHP04406 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.4■■□□□ 1.02
GAPDHP04406 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GAPDHP04406 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GAPDHP04406 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GAPDHP04406 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.39■■□□□ 1.02
GAPDHP04406 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GAPDHP04406 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
GAPDHP04406 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GAPDHP04406 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GAPDHP04406 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GAPDHP04406 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
GAPDHP04406 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GAPDHP04406 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.38■■□□□ 1.01
GAPDHP04406 AC005559.1-201ENST00000589661 871 ntBASIC21.38■■□□□ 1.01
GAPDHP04406 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GAPDHP04406 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.37■■□□□ 1.01
GAPDHP04406 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GAPDHP04406 DRD5P2-201ENST00000421395 2012 ntBASIC21.37■■□□□ 1.01
GAPDHP04406 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
GAPDHP04406 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GAPDHP04406 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.36■■□□□ 1.01
GAPDHP04406 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
GAPDHP04406 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GAPDHP04406 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.36■■□□□ 1.01
GAPDHP04406 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
GAPDHP04406 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GAPDHP04406 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GAPDHP04406 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
GAPDHP04406 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GAPDHP04406 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GAPDHP04406 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
GAPDHP04406 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GAPDHP04406 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
GAPDHP04406 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GAPDHP04406 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GAPDHP04406 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GAPDHP04406 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.33■■□□□ 1.01
GAPDHP04406 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GAPDHP04406 AP006261.1-201ENST00000584783 668 ntBASIC21.33■■□□□ 1.01
GAPDHP04406 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
GAPDHP04406 AC010864.1-201ENST00000609407 1511 ntBASIC21.33■■□□□ 1
GAPDHP04406 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
GAPDHP04406 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms