Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DUX4L22-201ENST00000618238 1269 ntBASIC29.44■■■□□ 2.3
GGPS1O95749 DUX4L20-201ENST00000619712 1269 ntBASIC29.44■■■□□ 2.3
GGPS1O95749 DUX4L21-201ENST00000622058 1269 ntBASIC29.44■■■□□ 2.3
GGPS1O95749 DUX4L10-201ENST00000622460 1267 ntBASIC29.44■■■□□ 2.3
GGPS1O95749 DUX4L25-201ENST00000624915 1269 ntBASIC29.44■■■□□ 2.3
GGPS1O95749 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
GGPS1O95749 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
GGPS1O95749 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
GGPS1O95749 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
GGPS1O95749 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
GGPS1O95749 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.43■■■□□ 2.3
GGPS1O95749 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
GGPS1O95749 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
GGPS1O95749 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
GGPS1O95749 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
GGPS1O95749 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
GGPS1O95749 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
GGPS1O95749 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
GGPS1O95749 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.4■■■□□ 2.3
GGPS1O95749 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.39■■■□□ 2.3
GGPS1O95749 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.39■■■□□ 2.3
GGPS1O95749 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.38■■■□□ 2.29
GGPS1O95749 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
GGPS1O95749 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
GGPS1O95749 LINC00273-201ENST00000539813 1452 ntBASIC29.37■■■□□ 2.29
GGPS1O95749 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
GGPS1O95749 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.37■■■□□ 2.29
GGPS1O95749 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
GGPS1O95749 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
GGPS1O95749 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
GGPS1O95749 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
GGPS1O95749 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.34■■■□□ 2.29
GGPS1O95749 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.34■■■□□ 2.29
GGPS1O95749 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
GGPS1O95749 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
GGPS1O95749 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
GGPS1O95749 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
GGPS1O95749 AL135925.1-201ENST00000605920 1701 ntBASIC29.34■■■□□ 2.29
GGPS1O95749 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.32■■■□□ 2.28
GGPS1O95749 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.32■■■□□ 2.28
GGPS1O95749 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.32■■■□□ 2.28
GGPS1O95749 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
GGPS1O95749 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.31■■■□□ 2.28
GGPS1O95749 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.3■■■□□ 2.28
GGPS1O95749 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.29■■■□□ 2.28
GGPS1O95749 AC127502.1-201ENST00000399971 1502 ntBASIC29.29■■■□□ 2.28
GGPS1O95749 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
GGPS1O95749 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
GGPS1O95749 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
GGPS1O95749 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.28
GGPS1O95749 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.26■■■□□ 2.27
GGPS1O95749 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.25■■■□□ 2.27
GGPS1O95749 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
GGPS1O95749 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.24■■■□□ 2.27
GGPS1O95749 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
GGPS1O95749 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
GGPS1O95749 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
GGPS1O95749 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
GGPS1O95749 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.22■■■□□ 2.27
GGPS1O95749 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
GGPS1O95749 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.21■■■□□ 2.27
GGPS1O95749 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
GGPS1O95749 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
GGPS1O95749 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
GGPS1O95749 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
GGPS1O95749 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
GGPS1O95749 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
GGPS1O95749 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
GGPS1O95749 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
GGPS1O95749 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
GGPS1O95749 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
GGPS1O95749 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.16■■■□□ 2.26
GGPS1O95749 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
GGPS1O95749 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
GGPS1O95749 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
GGPS1O95749 HSD17B1P1-201ENST00000590052 955 ntBASIC29.14■■■□□ 2.26
GGPS1O95749 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.14■■■□□ 2.26
GGPS1O95749 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.25
GGPS1O95749 AC135983.2-203ENST00000454486 1613 ntBASIC29.13■■■□□ 2.25
GGPS1O95749 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.13■■■□□ 2.25
GGPS1O95749 WHAMMP2-203ENST00000563942 1603 ntBASIC29.12■■■□□ 2.25
GGPS1O95749 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
GGPS1O95749 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
GGPS1O95749 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.12■■■□□ 2.25
GGPS1O95749 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
GGPS1O95749 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.11■■■□□ 2.25
GGPS1O95749 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
GGPS1O95749 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.11■■■□□ 2.25
GGPS1O95749 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
GGPS1O95749 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
GGPS1O95749 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.1■■■□□ 2.25
GGPS1O95749 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
GGPS1O95749 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.09■■■□□ 2.25
GGPS1O95749 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.09■■■□□ 2.25
GGPS1O95749 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
GGPS1O95749 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
GGPS1O95749 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
GGPS1O95749 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.06■■■□□ 2.24
GGPS1O95749 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
GGPS1O95749 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.05■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms