Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
NDUFS3O75489 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.88■■□□□ 1.73
NDUFS3O75489 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
NDUFS3O75489 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NDUFS3O75489 AP006261.1-201ENST00000584783 668 ntBASIC25.87■■□□□ 1.73
NDUFS3O75489 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.86■■□□□ 1.73
NDUFS3O75489 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.85■■□□□ 1.73
NDUFS3O75489 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
NDUFS3O75489 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.85■■□□□ 1.73
NDUFS3O75489 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NDUFS3O75489 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.84■■□□□ 1.73
NDUFS3O75489 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NDUFS3O75489 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NDUFS3O75489 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.83■■□□□ 1.73
NDUFS3O75489 AC127502.1-201ENST00000399971 1502 ntBASIC25.83■■□□□ 1.72
NDUFS3O75489 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
NDUFS3O75489 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NDUFS3O75489 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.82■■□□□ 1.72
NDUFS3O75489 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.8■■□□□ 1.72
NDUFS3O75489 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.8■■□□□ 1.72
NDUFS3O75489 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.8■■□□□ 1.72
NDUFS3O75489 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NDUFS3O75489 AC108673.1-201ENST00000510422 1159 ntBASIC25.79■■□□□ 1.72
NDUFS3O75489 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NDUFS3O75489 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
NDUFS3O75489 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NDUFS3O75489 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
NDUFS3O75489 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NDUFS3O75489 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NDUFS3O75489 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NDUFS3O75489 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.74■■□□□ 1.71
NDUFS3O75489 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
NDUFS3O75489 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NDUFS3O75489 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
NDUFS3O75489 AL162393.1-201ENST00000437852 946 ntBASIC25.73■■□□□ 1.71
NDUFS3O75489 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
NDUFS3O75489 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
NDUFS3O75489 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
NDUFS3O75489 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
NDUFS3O75489 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
NDUFS3O75489 MIR6090-201ENST00000622481 60 ntBASIC25.71■■□□□ 1.71
NDUFS3O75489 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NDUFS3O75489 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NDUFS3O75489 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.7■■□□□ 1.7
NDUFS3O75489 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NDUFS3O75489 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
NDUFS3O75489 AC087741.3-201ENST00000624270 1347 ntBASIC25.69■■□□□ 1.7
NDUFS3O75489 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
NDUFS3O75489 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.69■■□□□ 1.7
NDUFS3O75489 AP004833.2-201ENST00000532228 1454 ntBASIC25.69■■□□□ 1.7
NDUFS3O75489 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
NDUFS3O75489 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NDUFS3O75489 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NDUFS3O75489 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NDUFS3O75489 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
NDUFS3O75489 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
NDUFS3O75489 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NDUFS3O75489 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NDUFS3O75489 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NDUFS3O75489 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NDUFS3O75489 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.65■■□□□ 1.7
NDUFS3O75489 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
NDUFS3O75489 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NDUFS3O75489 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.64■■□□□ 1.7
NDUFS3O75489 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.64■■□□□ 1.7
NDUFS3O75489 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NDUFS3O75489 AC044849.2-201ENST00000606596 710 ntBASIC25.62■■□□□ 1.69
NDUFS3O75489 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NDUFS3O75489 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.62■■□□□ 1.69
NDUFS3O75489 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.62■■□□□ 1.69
NDUFS3O75489 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.61■■□□□ 1.69
NDUFS3O75489 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
NDUFS3O75489 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.61■■□□□ 1.69
NDUFS3O75489 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.6■■□□□ 1.69
NDUFS3O75489 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.6■■□□□ 1.69
NDUFS3O75489 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.59■■□□□ 1.69
NDUFS3O75489 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
NDUFS3O75489 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
NDUFS3O75489 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
NDUFS3O75489 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
NDUFS3O75489 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NDUFS3O75489 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.57■■□□□ 1.68
NDUFS3O75489 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NDUFS3O75489 DRD5P2-201ENST00000421395 2012 ntBASIC25.57■■□□□ 1.68
NDUFS3O75489 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
NDUFS3O75489 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NDUFS3O75489 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NDUFS3O75489 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NDUFS3O75489 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NDUFS3O75489 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.55■■□□□ 1.68
NDUFS3O75489 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NDUFS3O75489 AC142086.6-201ENST00000621154 1765 ntBASIC25.54■■□□□ 1.68
NDUFS3O75489 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NDUFS3O75489 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NDUFS3O75489 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NDUFS3O75489 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
NDUFS3O75489 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NDUFS3O75489 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NDUFS3O75489 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
NDUFS3O75489 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms