Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 MIR4449-201ENST00000578365 66 ntBASIC31.73■■■□□ 2.67
SEMA3EO15041 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.72■■■□□ 2.67
SEMA3EO15041 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.72■■■□□ 2.67
SEMA3EO15041 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.72■■■□□ 2.67
SEMA3EO15041 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.72■■■□□ 2.67
SEMA3EO15041 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SEMA3EO15041 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.7■■■□□ 2.67
SEMA3EO15041 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SEMA3EO15041 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SEMA3EO15041 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
SEMA3EO15041 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
SEMA3EO15041 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SEMA3EO15041 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.68■■■□□ 2.66
SEMA3EO15041 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SEMA3EO15041 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.67■■■□□ 2.66
SEMA3EO15041 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.66■■■□□ 2.66
SEMA3EO15041 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SEMA3EO15041 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.65■■■□□ 2.66
SEMA3EO15041 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
SEMA3EO15041 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
SEMA3EO15041 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
SEMA3EO15041 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SEMA3EO15041 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SEMA3EO15041 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
SEMA3EO15041 AC127502.1-201ENST00000399971 1502 ntBASIC31.64■■■□□ 2.66
SEMA3EO15041 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.63■■■□□ 2.65
SEMA3EO15041 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SEMA3EO15041 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
SEMA3EO15041 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
SEMA3EO15041 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SEMA3EO15041 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
SEMA3EO15041 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SEMA3EO15041 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
SEMA3EO15041 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
SEMA3EO15041 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.58■■■□□ 2.65
SEMA3EO15041 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SEMA3EO15041 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.57■■■□□ 2.64
SEMA3EO15041 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SEMA3EO15041 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SEMA3EO15041 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SEMA3EO15041 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SEMA3EO15041 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SEMA3EO15041 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
SEMA3EO15041 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.55■■■□□ 2.64
SEMA3EO15041 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SEMA3EO15041 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
SEMA3EO15041 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SEMA3EO15041 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
SEMA3EO15041 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SEMA3EO15041 AC135983.2-203ENST00000454486 1613 ntBASIC31.5■■■□□ 2.63
SEMA3EO15041 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.5■■■□□ 2.63
SEMA3EO15041 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
SEMA3EO15041 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.48■■■□□ 2.63
SEMA3EO15041 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.48■■■□□ 2.63
SEMA3EO15041 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SEMA3EO15041 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
SEMA3EO15041 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SEMA3EO15041 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.47■■■□□ 2.63
SEMA3EO15041 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.46■■■□□ 2.63
SEMA3EO15041 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SEMA3EO15041 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.46■■■□□ 2.63
SEMA3EO15041 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
SEMA3EO15041 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SEMA3EO15041 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.45■■■□□ 2.63
SEMA3EO15041 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
SEMA3EO15041 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
SEMA3EO15041 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.44■■■□□ 2.62
SEMA3EO15041 WHAMMP2-203ENST00000563942 1603 ntBASIC31.43■■■□□ 2.62
SEMA3EO15041 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SEMA3EO15041 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
SEMA3EO15041 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SEMA3EO15041 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.41■■■□□ 2.62
SEMA3EO15041 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
SEMA3EO15041 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.41■■■□□ 2.62
SEMA3EO15041 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.41■■■□□ 2.62
SEMA3EO15041 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.41■■■□□ 2.62
SEMA3EO15041 ST7-AS1-201ENST00000456775 1889 ntBASIC31.41■■■□□ 2.62
SEMA3EO15041 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SEMA3EO15041 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SEMA3EO15041 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SEMA3EO15041 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SEMA3EO15041 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SEMA3EO15041 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SEMA3EO15041 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SEMA3EO15041 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SEMA3EO15041 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
SEMA3EO15041 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.38■■■□□ 2.61
SEMA3EO15041 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SEMA3EO15041 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.36■■■□□ 2.61
SEMA3EO15041 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.36■■■□□ 2.61
SEMA3EO15041 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.36■■■□□ 2.61
SEMA3EO15041 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
SEMA3EO15041 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SEMA3EO15041 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
SEMA3EO15041 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SEMA3EO15041 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
SEMA3EO15041 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SEMA3EO15041 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
SEMA3EO15041 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
SEMA3EO15041 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms