Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC127502.1-201ENST00000399971 1502 ntBASIC24.81■■□□□ 1.56
RTCAO00442 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTCAO00442 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTCAO00442 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
RTCAO00442 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.8■■□□□ 1.56
RTCAO00442 MIR6090-201ENST00000622481 60 ntBASIC24.8■■□□□ 1.56
RTCAO00442 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.8■■□□□ 1.56
RTCAO00442 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RTCAO00442 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.79■■□□□ 1.56
RTCAO00442 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.79■■□□□ 1.56
RTCAO00442 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTCAO00442 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RTCAO00442 AC108673.1-201ENST00000510422 1159 ntBASIC24.76■■□□□ 1.55
RTCAO00442 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTCAO00442 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.75■■□□□ 1.55
RTCAO00442 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTCAO00442 RPS2P35-201ENST00000443417 897 ntBASIC24.75■■□□□ 1.55
RTCAO00442 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
RTCAO00442 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTCAO00442 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTCAO00442 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RTCAO00442 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.73■■□□□ 1.55
RTCAO00442 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
RTCAO00442 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTCAO00442 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTCAO00442 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.72■■□□□ 1.55
RTCAO00442 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTCAO00442 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTCAO00442 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTCAO00442 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTCAO00442 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RTCAO00442 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTCAO00442 AC044849.2-201ENST00000606596 710 ntBASIC24.69■■□□□ 1.54
RTCAO00442 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTCAO00442 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTCAO00442 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTCAO00442 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTCAO00442 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTCAO00442 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
RTCAO00442 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
RTCAO00442 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTCAO00442 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTCAO00442 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.65■■□□□ 1.54
RTCAO00442 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.65■■□□□ 1.54
RTCAO00442 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTCAO00442 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTCAO00442 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTCAO00442 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RTCAO00442 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.62■■□□□ 1.53
RTCAO00442 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTCAO00442 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.62■■□□□ 1.53
RTCAO00442 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.62■■□□□ 1.53
RTCAO00442 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RTCAO00442 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTCAO00442 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
RTCAO00442 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTCAO00442 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RTCAO00442 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTCAO00442 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.59■■□□□ 1.53
RTCAO00442 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.59■■□□□ 1.53
RTCAO00442 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTCAO00442 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RTCAO00442 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTCAO00442 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RTCAO00442 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.58■■□□□ 1.53
RTCAO00442 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.52
RTCAO00442 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RTCAO00442 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTCAO00442 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.57■■□□□ 1.52
RTCAO00442 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTCAO00442 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.56■■□□□ 1.52
RTCAO00442 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.56■■□□□ 1.52
RTCAO00442 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RTCAO00442 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.55■■□□□ 1.52
RTCAO00442 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
RTCAO00442 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTCAO00442 AP004833.2-201ENST00000532228 1454 ntBASIC24.53■■□□□ 1.52
RTCAO00442 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCAO00442 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCAO00442 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.52■■□□□ 1.52
RTCAO00442 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTCAO00442 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.52■■□□□ 1.52
RTCAO00442 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.51■■□□□ 1.51
RTCAO00442 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTCAO00442 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RTCAO00442 DRD5P2-201ENST00000421395 2012 ntBASIC24.49■■□□□ 1.51
RTCAO00442 AC021231.2-201ENST00000594613 730 ntBASIC24.49■■□□□ 1.51
RTCAO00442 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RTCAO00442 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RTCAO00442 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RTCAO00442 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCAO00442 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTCAO00442 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCAO00442 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
RTCAO00442 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTCAO00442 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCAO00442 AC100797.4-201ENST00000631653 1827 ntBASIC24.47■■□□□ 1.51
RTCAO00442 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
RTCAO00442 AC135983.2-203ENST00000454486 1613 ntBASIC24.47■■□□□ 1.51
RTCAO00442 WHAMMP2-203ENST00000563942 1603 ntBASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms